Genome ID:GCA_013391745.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2022.83

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
CHPCIHKC_632831020ErmBARO:3000375ErmB98.7898.79AF242872.1
CHPCIHKC_433617Streptococcus suis chloramphenicol acetyltransferaseARO:3004455Ssui_ACT_CHL94.6194.44AB080798.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
CHPCIHKC_431617cat(pC194)Chloramphenicol100.0094.78NC_002013
CHPCIHKC_632831020erm(B)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.59100.00X72021

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
CHPCIHKC_632831017erm(B)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)BLASTX98.78100.00WP_001038795.1
CHPCIHKC_433680cat-TCtype A-9 chloramphenicol O-acetyltransferase Cat-TCINTERNAL_STOP92.0794.54WP_032488880.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
CHPCIHKC_42199521288WalR1.73e-116transcriptional regulatory protein85.59100.43EPH95667
CHPCIHKC_125037250569CspR2.18e-28cold shock protein81.82100.00AAO82613
CHPCIHKC_125037250566CspA1.06e-27cold shock protein81.5498.48CAA62903