Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 1 | 4.12 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNFDHMCK_350 | 3692 | 5611 | tet(M) | ARO:3000186 | tet(M) | 93.27 | 100.00 | AB039845.1 |
| NNFDHMCK_32 | 2931 | 3794 | ANT(6)-Ia | ARO:3002626 | ANT(6)-Ia | 100.00 | 100.00 | KF648874.1 |
| NNFDHMCK_350 | 2122 | 3498 | tet(L) | ARO:3000179 | tet(L) | 98.69 | 100.00 | M11036.1 |
| NNFDHMCK_188 | 82 | 576 | lnuC | ARO:3002837 | lnuC | 98.17 | 100.00 | AY928180.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NNFDHMCK_32 | 2931 | 3794 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF421157 |
| NNFDHMCK_350 | 2122 | 3497 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.71 | 99.93 | AY081910 |
| NNFDHMCK_188 | 82 | 576 | lnu(C) | Lincomycin | 98.99 | 100.00 | AY928180 |
| NNFDHMCK_350 | 3692 | 5611 | tet(M) | Doxycycline, Tetracycline, Minocycline | 96.93 | 100.00 | FR671418 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNFDHMCK_32 | 2934 | 3794 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_002294505.1 |
| NNFDHMCK_350 | 2125 | 3498 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.13 | 100.00 | WP_002294500.1 |
| NNFDHMCK_188 | 85 | 576 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
| NNFDHMCK_350 | 3695 | 5611 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 98.12 | 100.00 | WP_063856394.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NNFDHMCK_333 | 8349 | 7642 | WalR | 6.45e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |