Genome ID:GCA_013401915.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
4024.47

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GDINKNGM_11340435962tet(M)ARO:3000186tet(M)93.27100.00AB039845.1
GDINKNGM_11324733849tet(L)ARO:3000179tet(L)98.69100.00M11036.1
GDINKNGM_1137831430catA8ARO:3004658catA897.21100.00JQ922409.1
GDINKNGM_377102596lnuCARO:3002837lnuC98.17100.00AY928180.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GDINKNGM_11324733848tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.7199.93AY081910
GDINKNGM_1137831430catChloramphenicol99.07100.00U35036
GDINKNGM_377102596lnu(C)Lincomycin98.99100.00AY928180
GDINKNGM_11340435962tet(M)Doxycycline, Tetracycline, Minocycline96.93100.00FR671418

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GDINKNGM_11324763849tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.13100.00WP_002294500.1
GDINKNGM_377105596lnu(C)lincosamide nucleotidyltransferase Lnu(C)BLASTX98.17100.00WP_063851341.1
GDINKNGM_11340465962tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX98.12100.00WP_063856394.1
GDINKNGM_1137861430catAtype A-8 chloramphenicol O-acetyltransferaseBLASTX97.67100.00WP_002352254.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GDINKNGM_288128835WalR2.55e-117transcriptional regulatory protein85.59100.43EPH95667
GDINKNGM_190308111CspR1.18e-29cold shock protein81.82100.00AAO82613
GDINKNGM_190308114CspA5.73e-29cold shock protein81.5498.48CAA62903