Genome ID:GCA_014046405.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FFMGDOCA_13715315716484bmrARO:3003007bmr99.74100.00M33768.1
FFMGDOCA_11589723590061ykkCARO:3003063ykkC100.00100.00AL009126.1
FFMGDOCA_11589406589723ykkDARO:3003064ykkD99.05100.00AL009126.1
FFMGDOCA_13484575485777bltARO:3003006blt99.50100.00L32599.1
FFMGDOCA_13467779468633aadKARO:3002627aadK97.54100.00AL009126.1
FFMGDOCA_17110056110976mphKARO:3004541mphK98.68100.00CP010314.1
FFMGDOCA_179672998162lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
FFMGDOCA_174707147664tmrBARO:3003059tmrB96.95100.00AL009126.3
FFMGDOCA_162914430790vmlRARO:3004476vmlR99.45100.18NC_000964.3
FFMGDOCA_142744930019Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FFMGDOCA_17110056110976mph(K)Spiramycin, Telithromycin99.02100.00NC_000964
FFMGDOCA_13467779468631aadKStreptomycin98.7199.77M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FFMGDOCA_162914430787vmlRABC-F type ribosomal protection protein VmlRBLASTX99.45100.00WP_003234144.1
FFMGDOCA_17110068110976mphKmacrolide 2'-phosphotransferase MphKBLASTX98.6899.02WP_003246254.1
FFMGDOCA_13467779468630aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
FFMGDOCA_74483645354satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
FFMGDOCA_15232126234723rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.83100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
FFMGDOCA_7538936540117capB0.0CapsuleImmune modulation99.75100.00NP_391471
FFMGDOCA_15137499138140hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
FFMGDOCA_7933910935106dhbC0.0BacillibactinNutritional/Metabolic factor99.42100.00NP_391079
FFMGDOCA_7933099933884dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
FFMGDOCA_15282495284258dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
FFMGDOCA_7936782937720dhbB0.0BacillibactinNutritional/Metabolic factor99.15100.00NP_391077
FFMGDOCA_7540132540581capC0.0CapsuleImmune modulation98.67100.00NP_391470
FFMGDOCA_7937740944876dhbF0.0BacillibactinNutritional/Metabolic factor98.67100.00NP_391076
FFMGDOCA_7540600541742capA0.0CapsuleImmune modulation98.60100.00NP_391469
FFMGDOCA_7935135936754dhbE0.0BacillibactinNutritional/Metabolic factor97.04100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FFMGDOCA_183176732903tufA0.0elongation factor Tu84.9695.69AHM69299
FFMGDOCA_11133210463pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
FFMGDOCA_11278180277404CodY8.32e-125nutrient-responsive regulator81.08100.00ACJ80679
FFMGDOCA_7682125681556ClpP6.30e-99part of proteolytic complex81.0597.44BAB94595
FFMGDOCA_11748234747842spxA16.54e-70redox-responsive transcription factor83.97100.00AAF21893
FFMGDOCA_11748234747842spx3.90e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
FFMGDOCA_192089321135SpoVG7.56e-39RNA-binding protein81.4879.41AAT02994
FFMGDOCA_168488784690CspA1.04e-31cold shock protein90.91100.00CAA62903
FFMGDOCA_15126267126073CspD7.52e-28cold shock protein80.0098.48CAC99957
FFMGDOCA_15126267126070CspB1.56e-27cold shock protein80.30100.00CAD00094