Genome ID:GCA_014171535.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKNAMFOO_1 | 2600584 | 2601438 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| EKNAMFOO_1 | 2583666 | 2584868 | blt | ARO:3003006 | blt | 99.00 | 100.00 | L32599.1 |
| EKNAMFOO_1 | 2358791 | 2359960 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| EKNAMFOO_1 | 1337608 | 1337925 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| EKNAMFOO_1 | 1337270 | 1337608 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| EKNAMFOO_1 | 873977 | 876547 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| EKNAMFOO_1 | 583111 | 584757 | vmlR | ARO:3004476 | vmlR | 98.54 | 100.18 | NC_000964.3 |
| EKNAMFOO_1 | 341991 | 342584 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| EKNAMFOO_1 | 291514 | 292947 | lmrB | ARO:3002813 | lmrB | 99.58 | 100.00 | JYFL01000006.1 |
| EKNAMFOO_1 | 278701 | 279621 | mphK | ARO:3004541 | mphK | 97.71 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EKNAMFOO_1 | 4042260 | 4043636 | tet(L) | Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline | 98.84 | 100.00 | X08034 |
| EKNAMFOO_1 | 2600584 | 2601438 | aadK | Streptomycin | 98.71 | 100.00 | M26879 |
| EKNAMFOO_1 | 278701 | 279621 | mph(K) | Spiramycin, Telithromycin | 97.72 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKNAMFOO_1 | 4042263 | 4043636 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 98.69 | 100.00 | WP_003242953.1 |
| EKNAMFOO_1 | 2600587 | 2601438 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| EKNAMFOO_1 | 583114 | 584757 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.54 | 100.00 | WP_003234144.1 |
| EKNAMFOO_1 | 278701 | 279618 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 97.71 | 100.00 | WP_003246254.1 |
| EKNAMFOO_1 | 4039789 | 4040307 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 90.17 | 100.00 | WP_003242546.1 |
| EKNAMFOO_1 | 2061193 | 2063790 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.60 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| EKNAMFOO_1 | 3150389 | 3151327 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| EKNAMFOO_1 | 3565759 | 3566940 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| EKNAMFOO_1 | 3151355 | 3152974 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.26 | 100.00 | NP_391078 |
| EKNAMFOO_1 | 3154225 | 3155010 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.24 | 100.00 | NP_391080 |
| EKNAMFOO_1 | 2157340 | 2157981 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.22 | 100.00 | NP_390062 |
| EKNAMFOO_1 | 3564134 | 3565276 | capA | 0.0 | Capsule | Immune modulation | 98.95 | 100.00 | NP_391469 |
| EKNAMFOO_1 | 3153003 | 3154199 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.91 | 100.00 | NP_391079 |
| EKNAMFOO_1 | 2014252 | 2016015 | dep/capD | 0.0 | Capsule | Immune modulation | 98.87 | 100.00 | NP_389723 |
| EKNAMFOO_1 | 3143233 | 3150369 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.71 | 100.00 | NP_391076 |
| EKNAMFOO_1 | 3565295 | 3565744 | capC | 0.0 | Capsule | Immune modulation | 98.67 | 100.00 | NP_391470 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EKNAMFOO_1 | 132400 | 133536 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| EKNAMFOO_1 | 18665 | 19534 | pdxS | 3.02e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| EKNAMFOO_1 | 1647468 | 1648244 | CodY | 3.30e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| EKNAMFOO_1 | 3416523 | 3417092 | ClpP | 2.45e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |