Genome ID:GCA_014791945.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GJDFFPFD_1565570566619clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GJDFFPFD_1565570566605cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
GJDFFPFD_125623082563684tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline87.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GJDFFPFD_1565570566616clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
GJDFFPFD_125623142563684tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.2199.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GJDFFPFD_135390883540269capB0.0CapsuleImmune modulation81.9699.66NP_391471
GJDFFPFD_135386243539073capC6.93e-112CapsuleImmune modulation83.3799.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GJDFFPFD_1133710134846tufA0.0elongation factor Tu86.8195.69AHM69299
GJDFFPFD_11903619905pdxS3.36e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
GJDFFPFD_116328471633623CodY4.76e-124nutrient-responsive regulator81.08100.00ACJ80679
GJDFFPFD_131263873125515lipA (SAUSA300_0829)1.29e-161lipoic acid synthetase80.8295.41ABD22039