Genome ID:GCA_014840205.2 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2277.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
KJHKIMIA_115689457943clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
KJHKIMIA_115690857943cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0998.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
KJHKIMIA_115689757943clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
KJHKIMIA_1103446106040rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.00100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
KJHKIMIA_77480075981capB0.0CapsuleImmune modulation81.7999.66NP_391471
KJHKIMIA_77433674785capC8.34e-117CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
KJHKIMIA_183164532781tufA0.0elongation factor Tu86.8195.69AHM69299
KJHKIMIA_291237111502pdxS1.34e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
KJHKIMIA_1310448309672CodY4.31e-125nutrient-responsive regulator81.08100.00ACJ80679
KJHKIMIA_56132628133020spxA14.20e-70redox-responsive transcription factor83.21100.00AAF21893
KJHKIMIA_117816577968CspA5.47e-32cold shock protein90.91100.00CAA62903
KJHKIMIA_42295923153CspD3.25e-28cold shock protein80.0098.48CAC99957
KJHKIMIA_42295923156CspB6.73e-28cold shock protein80.30100.00CAD00094
KJHKIMIA_117816577971CspR7.17e-27cold shock protein80.0098.48AAO82613
KJHKIMIA_348493185803lipA (SAUSA300_0829)7.10e-163lipoic acid synthetase80.8295.41ABD22039