Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CDCMBNIM_1 | 1233312 | 1234094 | ANT(9)-Ia | ARO:3002630 | ANT(9)-Ia | 100.00 | 100.00 | X02588.1 |
| CDCMBNIM_1 | 1232455 | 1233186 | ErmA | ARO:3000347 | ErmA | 99.59 | 100.00 | X03216.1 |
| CDCMBNIM_2 | 267269 | 268642 | AAC(6')-Ie-APH(2'')-Ia bifunctional protein | ARO:3002597 | AAC6_Ie_APH2_Ia | 100.00 | 95.41 | GU565967.1 |
| CDCMBNIM_3 | 27682 | 29607 | tet(M) | ARO:3000186 | tet(M) | 98.13 | 100.31 | AB039845.1 |
| CDCMBNIM_3 | 26096 | 27472 | tet(L) | ARO:3000179 | tet(L) | 99.13 | 100.00 | M11036.1 |
| CDCMBNIM_2 | 25152 | 26015 | ANT(6)-Ia | ARO:3002626 | ANT(6)-Ia | 100.00 | 100.00 | KF648874.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CDCMBNIM_2 | 25152 | 26015 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF421157 |
| CDCMBNIM_2 | 267306 | 268642 | aac(6')-aph(2'') | Gentamicin, Tobramycin, Netilmicin, Kanamycin, Amikacin, Dibekacin, Isepamicin, Fortimicin, Streptomycin | 100.00 | 92.85 | M13771 |
| CDCMBNIM_2 | 267306 | 268642 | aph(2'')-Ia | Amikacin, Gentamicin, Tobramycin, Kanamycin | 100.00 | 90.58 | AP009486 |
| CDCMBNIM_1 | 1233312 | 1234094 | ant(9)-Ia | Spectinomycin | 99.87 | 100.00 | X02588 |
| CDCMBNIM_1 | 1232455 | 1233186 | erm(A) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | X03216 |
| CDCMBNIM_3 | 26096 | 27472 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.78 | 100.00 | M29725 |
| CDCMBNIM_3 | 27682 | 29607 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.07 | 100.00 | X75073 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CDCMBNIM_2 | 25155 | 26015 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_002294505.1 |
| CDCMBNIM_1 | 1233315 | 1234094 | ant(9)-Ia | aminoglycoside nucleotidyltransferase ANT(9)-Ia | EXACTX | 100.00 | 100.00 | WP_000067268.1 |
| CDCMBNIM_2 | 267305 | 268642 | aac(6')-Ie/aph(2'')-Ia | bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia | BLASTX | 100.00 | 93.11 | WP_001028144.1 |
| CDCMBNIM_1 | 1232455 | 1233183 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 99.59 | 100.00 | WP_001072201.1 |
| CDCMBNIM_3 | 26099 | 27472 | tet(L) | tetracycline efflux MFS transporter Tet(L) | BLASTX | 99.34 | 100.00 | WP_001574277.1 |
| CDCMBNIM_3 | 27685 | 29607 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 98.91 | 100.00 | WP_000691736.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CDCMBNIM_1 | 52985 | 53692 | WalR | 6.85e-115 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |