Genome ID:GCA_014856585.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1110917.38

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DOFGBLLO_44157771158364tmrBARO:3003059tmrB96.95100.00AL009126.3
DOFGBLLO_44109890111329lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
DOFGBLLO_289429094607ykkDARO:3003064ykkD98.10100.00AL009126.1
DOFGBLLO_289395294290ykkCARO:3003063ykkC99.11100.00AL009126.1
DOFGBLLO_753065931513aadKARO:3002627aadK97.54100.00AL009126.1
DOFGBLLO_751189513097bltARO:3003006blt100.00100.00L32599.1
DOFGBLLO_90934311913Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
DOFGBLLO_42905210221bmrARO:3003007bmr99.74100.00M33768.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DOFGBLLO_753066131513aadKStreptomycin98.3699.77M26879
DOFGBLLO_449707997998mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DOFGBLLO_474912750767vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.81100.00WP_003234144.1
DOFGBLLO_753066231513aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
DOFGBLLO_788789088408satAstreptothricin N-acetyltransferase SatABLASTX93.06100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DOFGBLLO_391592217064capA0.0CapsuleImmune modulation99.74100.00NP_391469
DOFGBLLO_391425815439capB0.0CapsuleImmune modulation99.66100.00NP_391471
DOFGBLLO_336082161759dhbB0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391077
DOFGBLLO_391545415903capC0.0CapsuleImmune modulation99.56100.00NP_391470
DOFGBLLO_335714957934dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
DOFGBLLO_321761919382dep/capD0.0CapsuleImmune modulation99.26100.00NP_389723
DOFGBLLO_336177968915dhbF0.0BacillibactinNutritional/Metabolic factor99.03100.00NP_391076
DOFGBLLO_335796059156dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
DOFGBLLO_118856089201hlyIII0.0Hemolysin IIIExotoxin97.82100.00NP_390062
DOFGBLLO_335917460793dhbE0.0BacillibactinNutritional/Metabolic factor97.78100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DOFGBLLO_512800626870tufA0.0elongation factor Tu85.7595.69AHM69299
DOFGBLLO_791114210273pdxS1.93e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
DOFGBLLO_486145862234CodY1.40e-125nutrient-responsive regulator81.08100.00ACJ80679
DOFGBLLO_56198019198588ClpP1.57e-99part of proteolytic complex81.0597.44BAB94595
DOFGBLLO_54968910081spxA13.54e-71redox-responsive transcription factor83.97100.00AAF21893
DOFGBLLO_54968910081spx2.11e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
DOFGBLLO_302049220734SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
DOFGBLLO_4739794176CspA1.37e-31cold shock protein89.39100.00CAA62903
DOFGBLLO_117670876514CspD3.12e-28cold shock protein80.0098.48CAC99957
DOFGBLLO_613122631032CspB4.07e-28cold shock protein83.0898.48CAD00094
DOFGBLLO_4739794173CspR4.30e-27cold shock protein80.0098.48AAO82613