Genome ID:GCA_014856585.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 11 | 10 | 9 | 17.38 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFGBLLO_44 | 157771 | 158364 | tmrB | ARO:3003059 | tmrB | 96.95 | 100.00 | AL009126.3 |
| DOFGBLLO_44 | 109890 | 111329 | lmrB | ARO:3002813 | lmrB | 98.74 | 100.42 | JYFL01000006.1 |
| DOFGBLLO_28 | 94290 | 94607 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| DOFGBLLO_28 | 93952 | 94290 | ykkC | ARO:3003063 | ykkC | 99.11 | 100.00 | AL009126.1 |
| DOFGBLLO_75 | 30659 | 31513 | aadK | ARO:3002627 | aadK | 97.54 | 100.00 | AL009126.1 |
| DOFGBLLO_75 | 11895 | 13097 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
| DOFGBLLO_90 | 9343 | 11913 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| DOFGBLLO_42 | 9052 | 10221 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DOFGBLLO_75 | 30661 | 31513 | aadK | Streptomycin | 98.36 | 99.77 | M26879 |
| DOFGBLLO_44 | 97079 | 97998 | mph(K) | Spiramycin, Telithromycin | 97.61 | 99.89 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DOFGBLLO_47 | 49127 | 50767 | vmlR | ABC-F type ribosomal protection protein VmlR | INTERNAL_STOP | 97.81 | 100.00 | WP_003234144.1 |
| DOFGBLLO_75 | 30662 | 31513 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 97.54 | 100.00 | WP_003229862.1 |
| DOFGBLLO_78 | 87890 | 88408 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 93.06 | 100.00 | WP_003242546.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DOFGBLLO_39 | 15922 | 17064 | capA | 0.0 | Capsule | Immune modulation | 99.74 | 100.00 | NP_391469 |
| DOFGBLLO_39 | 14258 | 15439 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| DOFGBLLO_33 | 60821 | 61759 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.57 | 100.00 | NP_391077 |
| DOFGBLLO_39 | 15454 | 15903 | capC | 0.0 | Capsule | Immune modulation | 99.56 | 100.00 | NP_391470 |
| DOFGBLLO_33 | 57149 | 57934 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.36 | 100.00 | NP_391080 |
| DOFGBLLO_32 | 17619 | 19382 | dep/capD | 0.0 | Capsule | Immune modulation | 99.26 | 100.00 | NP_389723 |
| DOFGBLLO_33 | 61779 | 68915 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.03 | 100.00 | NP_391076 |
| DOFGBLLO_33 | 57960 | 59156 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.58 | 100.00 | NP_391079 |
| DOFGBLLO_11 | 88560 | 89201 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 97.82 | 100.00 | NP_390062 |
| DOFGBLLO_33 | 59174 | 60793 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 97.78 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DOFGBLLO_51 | 28006 | 26870 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| DOFGBLLO_79 | 11142 | 10273 | pdxS | 1.93e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.45 | 98.31 | ACE61268 |
| DOFGBLLO_48 | 61458 | 62234 | CodY | 1.40e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DOFGBLLO_56 | 198019 | 198588 | ClpP | 1.57e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DOFGBLLO_54 | 9689 | 10081 | spxA1 | 3.54e-71 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| DOFGBLLO_54 | 9689 | 10081 | spx | 2.11e-69 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| DOFGBLLO_30 | 20492 | 20734 | SpoVG | 7.48e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DOFGBLLO_47 | 3979 | 4176 | CspA | 1.37e-31 | cold shock protein | 89.39 | 100.00 | CAA62903 |
| DOFGBLLO_11 | 76708 | 76514 | CspD | 3.12e-28 | cold shock protein | 80.00 | 98.48 | CAC99957 |
| DOFGBLLO_61 | 31226 | 31032 | CspB | 4.07e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |
| DOFGBLLO_47 | 3979 | 4173 | CspR | 4.30e-27 | cold shock protein | 80.00 | 98.48 | AAO82613 |