Genome ID:GCA_014878105.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210817.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
CEOCDPLC_10923968924306ykkCARO:3003063ykkC98.21100.00AL009126.1
CEOCDPLC_10923651923968ykkDARO:3003064ykkD98.10100.00AL009126.1
CEOCDPLC_21453848455050bltARO:3003006blt98.00100.00L32599.1
CEOCDPLC_21434858435712aadKARO:3002627aadK97.18100.00AL009126.1
CEOCDPLC_32361476362396mphKARO:3004541mphK97.71100.00CP010314.1
CEOCDPLC_32348177349610lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
CEOCDPLC_32298459299052tmrBARO:3003059tmrB98.48100.00AL009126.3
CEOCDPLC_538353384702bmrARO:3003007bmr99.74100.00M33768.1
CEOCDPLC_322902330651vmlRARO:3004476vmlR95.2099.09NC_000964.3
CEOCDPLC_512741529985Bacillus subtilis mprFARO:3003324Bsub_mprF99.88100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
CEOCDPLC_21434858435712aadKStreptomycin98.13100.00M26879
CEOCDPLC_32361476362396mph(K)Spiramycin, Telithromycin97.07100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
CEOCDPLC_32361479362396mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
CEOCDPLC_21434858435709aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.18100.00WP_003229862.1
CEOCDPLC_322902330645vmlRABC-F type ribosomal protection protein VmlRBLASTX95.3898.90WP_003234144.1
CEOCDPLC_504177542287satAstreptothricin N-acetyltransferase SatABLASTX91.2398.84WP_003242546.1
CEOCDPLC_10244683247280rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.94100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
CEOCDPLC_43168114169295capB0.0CapsuleImmune modulation99.41100.00NP_391471
CEOCDPLC_43169310169759capC0.0CapsuleImmune modulation99.33100.00NP_391470
CEOCDPLC_43169778170920capA0.0CapsuleImmune modulation99.30100.00NP_391469
CEOCDPLC_52176680177465dhbA0.0BacillibactinNutritional/Metabolic factor98.98100.00NP_391080
CEOCDPLC_102318623827hlyIII0.0Hemolysin IIIExotoxin98.75100.00NP_390062
CEOCDPLC_52180363181301dhbB0.0BacillibactinNutritional/Metabolic factor98.72100.00NP_391077
CEOCDPLC_52177491178687dhbC0.0BacillibactinNutritional/Metabolic factor98.41100.00NP_391079
CEOCDPLC_52181321188451dhbF0.0BacillibactinNutritional/Metabolic factor98.3299.99NP_391076
CEOCDPLC_10290021291784dep/capD0.0CapsuleImmune modulation98.07100.00NP_389723
CEOCDPLC_52178716180335dhbE0.0BacillibactinNutritional/Metabolic factor97.59100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
CEOCDPLC_23178432920tufA0.0elongation factor Tu84.9695.69AHM69299
CEOCDPLC_743345203pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
CEOCDPLC_10613109612333CodY9.86e-125nutrient-responsive regulator81.08100.00ACJ80679
CEOCDPLC_43326935326366ClpP2.49e-99part of proteolytic complex81.0597.44BAB94595
CEOCDPLC_1010816571081265spxA17.75e-70redox-responsive transcription factor83.97100.00AAF21893
CEOCDPLC_1010816571081265spx4.62e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
CEOCDPLC_32058920831SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
CEOCDPLC_328406883871CspA1.87e-31cold shock protein90.91100.00CAA62903
CEOCDPLC_15999160185CspB8.30e-28cold shock protein83.0898.48CAD00094