Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 2 | 4.47 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKFEFDDP_20 | 6540 | 7271 | ErmA | ARO:3000347 | ErmA | 99.18 | 100.00 | X03216.1 |
| NKFEFDDP_59 | 6055 | 7482 | fexA | ARO:3002704 | fexA | 97.68 | 100.00 | AJ549214.1 |
| NKFEFDDP_20 | 5632 | 6414 | ANT(9)-Ia | ARO:3002630 | ANT(9)-Ia | 100.00 | 100.00 | X02588.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NKFEFDDP_20 | 5632 | 6414 | ant(9)-Ia | Spectinomycin | 99.87 | 100.00 | X02588 |
| NKFEFDDP_20 | 6540 | 7271 | erm(A) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | X03216 |
| NKFEFDDP_15 | 69 | 563 | lnu(C) | Lincomycin | 98.79 | 100.00 | AY928180 |
| NKFEFDDP_59 | 6055 | 7482 | fexA | Chloramphenicol, Florfenicol | 98.39 | 100.00 | AJ549214 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKFEFDDP_20 | 5632 | 6411 | ant(9)-Ia | aminoglycoside nucleotidyltransferase ANT(9)-Ia | EXACTX | 100.00 | 100.00 | WP_000067268.1 |
| NKFEFDDP_20 | 6543 | 7271 | erm(A) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A) | BLASTX | 99.18 | 100.00 | WP_001072201.1 |
| NKFEFDDP_15 | 69 | 560 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
| NKFEFDDP_59 | 6058 | 7482 | fexA | chloramphenicol/florfenicol efflux MFS transporter FexA | BLASTX | 97.68 | 100.00 | WP_015585966.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NKFEFDDP_9 | 20421 | 19714 | WalR | 9.42e-116 | transcriptional regulatory protein | 85.17 | 100.43 | EPH95667 |
| NKFEFDDP_14 | 22418 | 22615 | CspR | 7.34e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| NKFEFDDP_14 | 22418 | 22612 | CspA | 3.58e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |