Genome ID:GCA_015548395.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FOFIHLKC_13 | 90434 | 92380 | tet(Q) | ARO:3000191 | tet(Q) | 97.02 | 98.63 | Z21523.1 |
| FOFIHLKC_3 | 74135 | 75100 | CfxA2 | ARO:3003002 | CfxA2 | 99.69 | 100.00 | AF118110.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FOFIHLKC_3 | 74135 | 75100 | cfxA3 | Ampicillin | 99.79 | 100.00 | AF472622 |
| FOFIHLKC_3 | 74135 | 75100 | cfxA4 | Unknown Beta-lactam | 99.79 | 100.00 | AY769933 |
| FOFIHLKC_3 | 74135 | 75100 | cfxA5 | Unknown Beta-lactam | 99.79 | 100.00 | AY769934 |
| FOFIHLKC_3 | 74135 | 75100 | cfxA | Cefoxitin, Ampicillin | 99.79 | 100.00 | U38243 |
| FOFIHLKC_13 | 90468 | 92380 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.22 | 99.33 | L33696 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FOFIHLKC_3 | 74135 | 75097 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.69 | 100.00 | WP_004339683.1 |
| FOFIHLKC_13 | 90467 | 92380 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.81 | 99.53 | WP_004293868.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FOFIHLKC_4 | 148851 | 150431 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |