Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 0 | 1 | 6.08 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEIGILCJ_26 | 29649 | 30449 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| MEIGILCJ_26 | 28204 | 29343 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| MEIGILCJ_26 | 26869 | 28005 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| MEIGILCJ_26 | 25830 | 26693 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| MEIGILCJ_42 | 4630 | 6555 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MEIGILCJ_42 | 4630 | 6555 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| MEIGILCJ_26 | 26869 | 28035 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| MEIGILCJ_26 | 29649 | 30449 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.75 | 100.00 | M62487 |
| MEIGILCJ_14 | 47112 | 48062 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| MEIGILCJ_14 | 47112 | 48062 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| MEIGILCJ_14 | 47112 | 48062 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| MEIGILCJ_14 | 47112 | 48062 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MEIGILCJ_26 | 25833 | 26693 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| MEIGILCJ_26 | 26872 | 28035 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| MEIGILCJ_26 | 28207 | 29343 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| MEIGILCJ_42 | 4633 | 6555 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| MEIGILCJ_26 | 29649 | 30446 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.25 | 100.00 | WP_063844771.1 |
| MEIGILCJ_14 | 47111 | 48064 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MEIGILCJ_11 | 220123 | 218543 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |