Genome ID:GCA_015602625.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OKPDGHDC_124088702409790mphKARO:3004541mphK98.04100.00CP010314.1
OKPDGHDC_123955432396976lmrBARO:3002813lmrB99.58100.00JYFL01000006.1
OKPDGHDC_123458432346436tmrBARO:3003059tmrB97.97100.00AL009126.3
OKPDGHDC_121003842102027vmlRARO:3004476vmlR98.54100.00NC_000964.3
OKPDGHDC_117922791794849Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
OKPDGHDC_113331521333490ykkCARO:3003063ykkC100.00100.00AL009126.1
OKPDGHDC_113328351333152ykkDARO:3003064ykkD99.05100.00AL009126.1
OKPDGHDC_1255988257157bmrARO:3003007bmr99.74100.00M33768.1
OKPDGHDC_13019031392bltARO:3003006blt100.00100.00L32599.1
OKPDGHDC_11180112655aadKARO:3002627aadK97.89100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OKPDGHDC_127100682711444tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00D12567
OKPDGHDC_11180112653aadKStreptomycin98.5999.77M26879
OKPDGHDC_124088702409790mph(K)Spiramycin, Telithromycin97.83100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OKPDGHDC_127100682711441tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_063856081.1
OKPDGHDC_121003842102024vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
OKPDGHDC_124088732409790mphKmacrolide 2'-phosphotransferase MphKBLASTX98.04100.00WP_003246254.1
OKPDGHDC_11180112652aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
OKPDGHDC_127134242713942satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
OKPDGHDC_1552139554736rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OKPDGHDC_135988123599750dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
OKPDGHDC_132008653202046capB0.0CapsuleImmune modulation99.66100.00NP_391471
OKPDGHDC_135971653598784dhbE0.0BacillibactinNutritional/Metabolic factor99.26100.00NP_391078
OKPDGHDC_135951293595914dhbA0.0BacillibactinNutritional/Metabolic factor99.24100.00NP_391080
OKPDGHDC_1457949458590hlyIII0.0Hemolysin IIIExotoxin99.22100.00NP_390062
OKPDGHDC_135997703606906dhbF0.0BacillibactinNutritional/Metabolic factor99.06100.00NP_391076
OKPDGHDC_132025293203671capA0.0CapsuleImmune modulation98.95100.00NP_391469
OKPDGHDC_135959403597136dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
OKPDGHDC_1599587601350dep/capD0.0CapsuleImmune modulation98.87100.00NP_389723
OKPDGHDC_132020613202510capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OKPDGHDC_125524432551307tufA0.0elongation factor Tu84.9695.69AHM69299
OKPDGHDC_126662572665388pdxS3.11e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
OKPDGHDC_110229591022183CodY3.40e-124nutrient-responsive regulator81.08100.00ACJ80679
OKPDGHDC_133434553342886ClpP2.52e-98part of proteolytic complex81.0597.44BAB94595