Genome ID:GCA_015645615.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
EDBEALGE_23471694472548aadKARO:3002627aadK100.00100.00AL009126.1
EDBEALGE_23452985454187bltARO:3003006blt100.00100.00L32599.1
EDBEALGE_1424739425056ykkDARO:3003064ykkD100.00100.00AL009126.1
EDBEALGE_1424401424739ykkCARO:3003063ykkC100.00100.00AL009126.1
EDBEALGE_34276567279137Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
EDBEALGE_23230666231835bmrARO:3003007bmr99.74100.00M33768.1
EDBEALGE_45107960108880mphKARO:3004541mphK100.00100.00CP010314.1
EDBEALGE_459462696065lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
EDBEALGE_24735548998vmlRARO:3004476vmlR100.00100.00NC_000964.3
EDBEALGE_454497045563tmrBARO:3003059tmrB100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
EDBEALGE_23471694472548aadKStreptomycin100.00100.00M26879
EDBEALGE_45107960108880mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
EDBEALGE_789037191747tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
EDBEALGE_23471697472548aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
EDBEALGE_45107963108880mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
EDBEALGE_788785388371satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
EDBEALGE_789037491747tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
EDBEALGE_24735848998vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
EDBEALGE_675478657380rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
EDBEALGE_12519118520260capA0.0CapsuleImmune modulation100.00100.00NP_391469
EDBEALGE_12520743521924capB0.0CapsuleImmune modulation100.00100.00NP_391471
EDBEALGE_12520279520728capC0.0CapsuleImmune modulation100.00100.00NP_391470
EDBEALGE_6781289891dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
EDBEALGE_12112782113567dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
EDBEALGE_12108946109884dhbB0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391077
EDBEALGE_12111560112756dhbC0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391079
EDBEALGE_12109912111531dhbE0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391078
EDBEALGE_12101790108926dhbF0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391076
EDBEALGE_233132031961hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EDBEALGE_33163832774tufA0.0elongation factor Tu84.9695.69AHM69299
EDBEALGE_942315100pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
EDBEALGE_1738003738779CodY8.24e-125nutrient-responsive regulator81.08100.00ACJ80679
EDBEALGE_12367506368075ClpP5.52e-99part of proteolytic complex81.0597.44BAB94595
EDBEALGE_1275578275970spxA12.44e-69redox-responsive transcription factor83.21100.00AAF21893
EDBEALGE_43457534333SpoVG7.48e-39RNA-binding protein81.4879.41AAT02994
EDBEALGE_218832080CspA3.37e-32cold shock protein90.91100.00CAA62903
EDBEALGE_234392344117CspD5.59e-28cold shock protein81.5498.48CAC99957