Genome ID：GCA_015645665.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
JCNLCHDG_12	715951	717120	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
JCNLCHDG_12	493600	494802	blt	ARO:3003006	blt	100.00	100.00	L32599.1
JCNLCHDG_12	475239	476093	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
JCNLCHDG_1	424736	425053	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
JCNLCHDG_1	424398	424736	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
JCNLCHDG_30	162826	163419	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
JCNLCHDG_30	112323	113762	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
JCNLCHDG_30	99508	100428	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
JCNLCHDG_33	29126	30769	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
JCNLCHDG_28	27249	29819	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
JCNLCHDG_12	475239	476093	aadK	Streptomycin	100.00	100.00	M26879
JCNLCHDG_30	99508	100428	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
JCNLCHDG_32	90362	91738	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
JCNLCHDG_12	475239	476090	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
JCNLCHDG_30	99508	100425	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
JCNLCHDG_32	87844	88362	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
JCNLCHDG_32	90365	91738	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
JCNLCHDG_33	29126	30766	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
JCNLCHDG_29	54786	57380	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
JCNLCHDG_23	519092	520234	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
JCNLCHDG_23	520717	521898	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
JCNLCHDG_23	520253	520702	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
JCNLCHDG_29	8128	9891	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
JCNLCHDG_23	112782	113567	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
JCNLCHDG_23	108946	109884	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
JCNLCHDG_23	111560	112756	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
JCNLCHDG_23	109912	111531	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
JCNLCHDG_23	101790	108926	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
JCNLCHDG_12	915837	916478	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
JCNLCHDG_2	31638	32774	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
JCNLCHDG_4	4231	5100	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
JCNLCHDG_1	738000	738776	CodY	8.24e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
JCNLCHDG_23	367505	368074	ClpP	5.52e-99	part of proteolytic complex	81.05	97.44	BAB94595
JCNLCHDG_1	275575	275967	spxA1	2.44e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
JCNLCHDG_3	20512	20754	SpoVG	2.72e-38	RNA-binding protein	80.25	79.41	AAT02994
JCNLCHDG_33	76241	76044	CspA	3.37e-32	cold shock protein	90.91	100.00	CAA62903
JCNLCHDG_12	903875	903681	CspD	5.93e-28	cold shock protein	81.54	98.48	CAC99957