Genome ID：GCA_015645705.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	8	18.25

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
LDHOENAK_1	503015	503353	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
LDHOENAK_1	502698	503015	ykkD	ARO:3003064	ykkD	100.00	100.00	AL009126.1
LDHOENAK_23	459253	460107	aadK	ARO:3002627	aadK	100.00	100.00	AL009126.1
LDHOENAK_23	440544	441746	blt	ARO:3003006	blt	100.00	100.00	L32599.1
LDHOENAK_23	218226	219395	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
LDHOENAK_45	162828	163421	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
LDHOENAK_45	112325	113764	lmrB	ARO:3002813	lmrB	99.79	100.42	JYFL01000006.1
LDHOENAK_45	99510	100430	mphK	ARO:3004541	mphK	100.00	100.00	CP010314.1
LDHOENAK_2	47355	48998	vmlR	ARO:3004476	vmlR	100.00	100.00	NC_000964.3
LDHOENAK_34	27249	29819	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	100.00	100.00	AL009126.3

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
LDHOENAK_23	459253	460107	aadK	Streptomycin	100.00	100.00	M26879
LDHOENAK_45	99510	100430	mph(K)	Spiramycin, Telithromycin	100.00	100.00	NC_000964
LDHOENAK_67	90371	91747	tet(L)	Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline	100.00	100.00	X08034

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
LDHOENAK_23	459256	460107	aadK	aminoglycoside 6-adenylyltransferase AadK	EXACTX	100.00	100.00	WP_003229862.1
LDHOENAK_45	99510	100427	mphK	macrolide 2'-phosphotransferase MphK	EXACTX	100.00	100.00	WP_003246254.1
LDHOENAK_67	87853	88371	satA	streptothricin N-acetyltransferase SatA	EXACTX	100.00	100.00	WP_003242546.1
LDHOENAK_67	90374	91747	tet(L)	tetracycline efflux MFS transporter Tet(L)	EXACTX	100.00	100.00	WP_003242953.1
LDHOENAK_2	47358	48998	vmlR	ABC-F type ribosomal protection protein VmlR	EXACTX	100.00	100.00	WP_003234144.1
LDHOENAK_3	54786	57380	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	81.15	99.88	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LDHOENAK_12	398113	399255	capA	0.0	Capsule	Immune modulation	100.00	100.00	NP_391469
LDHOENAK_12	396449	397630	capB	0.0	Capsule	Immune modulation	100.00	100.00	NP_391471
LDHOENAK_12	397645	398094	capC	0.0	Capsule	Immune modulation	100.00	100.00	NP_391470
LDHOENAK_3	8128	9891	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
LDHOENAK_12	804780	805565	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
LDHOENAK_12	808463	809401	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391077
LDHOENAK_12	805591	806787	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391079
LDHOENAK_12	806816	808435	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391078
LDHOENAK_12	809421	816557	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391076
LDHOENAK_23	18871	19512	hlyIII	0.0	Hemolysin III	Exotoxin	100.00	100.00	NP_390062

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LDHOENAK_4	31638	32774	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
LDHOENAK_8	11182	10313	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
LDHOENAK_1	189751	188975	CodY	7.52e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
LDHOENAK_12	550842	550273	ClpP	5.52e-99	part of proteolytic complex	81.05	97.44	BAB94595
LDHOENAK_1	652176	651784	spxA1	2.23e-69	redox-responsive transcription factor	83.21	100.00	AAF21893
LDHOENAK_5	34575	34333	SpoVG	2.72e-38	RNA-binding protein	80.25	79.41	AAT02994
LDHOENAK_2	1883	2080	CspA	3.37e-32	cold shock protein	90.91	100.00	CAA62903
LDHOENAK_23	31474	31668	CspD	5.51e-28	cold shock protein	81.54	98.48	CAC99957