Genome ID:GCA_015655285.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 5 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DJMCILAF_1 | 2778545 | 2779745 | mef(A) | Erythromycin, Azithromycin | 94.75 | 98.60 | AF227520 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DJMCILAF_1 | 2778542 | 2779744 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.75 | 98.28 | WP_012102963.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DJMCILAF_1 | 136929 | 138080 | tufA | 0.0 | elongation factor Tu | 86.46 | 97.21 | AHM69299 |
| DJMCILAF_1 | 85165 | 86034 | pdxS | 3.41e-150 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DJMCILAF_1 | 1336461 | 1337237 | CodY | 7.71e-127 | nutrient-responsive regulator | 81.85 | 100.00 | ACJ80679 |
| DJMCILAF_1 | 1336461 | 1337237 | codY | 2.50e-123 | global regulator and isoleucine sensor | 80.69 | 100.00 | ASW39076 |
| DJMCILAF_1 | 941729 | 941160 | ClpP | 1.45e-102 | part of proteolytic complex | 83.68 | 97.44 | BAB94595 |
| DJMCILAF_1 | 3537958 | 3537272 | WalR | 4.49e-102 | transcriptional regulatory protein | 80.79 | 97.44 | EPH95667 |