Genome ID:GCA_015880865.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
COEDGJGN_17594594595448aadKARO:3002627aadK98.24100.00AL009126.1
COEDGJGN_17565463566665bltARO:3003006blt99.00100.00L32599.1
COEDGJGN_17363054364223bmrARO:3003007bmr99.23100.00M33768.1
COEDGJGN_26221528221866ykkCARO:3003063ykkC100.00100.00AL009126.1
COEDGJGN_26221211221528ykkDARO:3003064ykkD99.05100.00AL009126.1
COEDGJGN_21156503157096tmrBARO:3003059tmrB96.95100.00AL009126.3
COEDGJGN_21105950107389lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
COEDGJGN_219313694056mphKARO:3004541mphK100.00100.00CP010314.1
COEDGJGN_102877930422vmlRARO:3004476vmlR98.90100.00NC_000964.3
COEDGJGN_52751630086Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
COEDGJGN_219313694056mph(K)Spiramycin, Telithromycin99.78100.00NC_000964
COEDGJGN_17594596595448aadKStreptomycin98.5999.77M26879
COEDGJGN_234052741903tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.40100.00D12567

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
COEDGJGN_219313694053mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
COEDGJGN_102877930419vmlRABC-F type ribosomal protection protein VmlRBLASTX98.90100.00WP_003234144.1
COEDGJGN_234052741900tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.25100.00WP_063856081.1
COEDGJGN_17594597595448aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
COEDGJGN_234390844426satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
COEDGJGN_175933561932rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.94100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
COEDGJGN_17163869164510hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
COEDGJGN_15525885527066capB0.0CapsuleImmune modulation99.75100.00NP_391471
COEDGJGN_15113155113940dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
COEDGJGN_15524260525402capA0.0CapsuleImmune modulation99.47100.00NP_391469
COEDGJGN_15525421525870capC0.0CapsuleImmune modulation99.33100.00NP_391470
COEDGJGN_15109319110257dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
COEDGJGN_15111933113129dhbC0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391079
COEDGJGN_17919510958dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
COEDGJGN_15102163109299dhbF0.0BacillibactinNutritional/Metabolic factor98.77100.00NP_391076
COEDGJGN_15110285111904dhbE0.0BacillibactinNutritional/Metabolic factor98.03100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
COEDGJGN_113480335939tufA0.0elongation factor Tu84.9695.69AHM69299
COEDGJGN_81148810619pdxS1.36e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
COEDGJGN_279376894544CodY3.19e-125nutrient-responsive regulator81.08100.00ACJ80679
COEDGJGN_15364536365105ClpP3.25e-99part of proteolytic complex81.0597.44BAB94595
COEDGJGN_26373414373022spxA14.16e-70redox-responsive transcription factor83.97100.00AAF21893
COEDGJGN_26373414373022spx2.48e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
COEDGJGN_33488734645SpoVG7.96e-39RNA-binding protein81.4879.41AAT02994
COEDGJGN_108331783120CspA9.75e-32cold shock protein90.91100.00CAA62903
COEDGJGN_26616577616771CspB5.99e-27cold shock protein83.0898.48CAD00094