Genome ID:GCA_015881035.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
CFHKNLOA_21596088596942aadKARO:3002627aadK98.24100.00AL009126.1
CFHKNLOA_21566957568159bltARO:3003006blt99.00100.00L32599.1
CFHKNLOA_21364548365717bmrARO:3003007bmr99.23100.00M33768.1
CFHKNLOA_3266666269236Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
CFHKNLOA_18221331221669ykkCARO:3003063ykkC100.00100.00AL009126.1
CFHKNLOA_18221014221331ykkDARO:3003064ykkD99.05100.00AL009126.1
CFHKNLOA_16195194196837vmlRARO:3004476vmlR98.90100.00NC_000964.3
CFHKNLOA_1153627154220tmrBARO:3003059tmrB96.95100.00AL009126.3
CFHKNLOA_1103074104513lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
CFHKNLOA_19026091180mphKARO:3004541mphK100.00100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
CFHKNLOA_19026091180mph(K)Spiramycin, Telithromycin99.78100.00NC_000964
CFHKNLOA_21596090596942aadKStreptomycin98.5999.77M26879
CFHKNLOA_224053841914tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.40100.00D12567

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
CFHKNLOA_19026091177mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
CFHKNLOA_16195197196837vmlRABC-F type ribosomal protection protein VmlRBLASTX98.90100.00WP_003234144.1
CFHKNLOA_224053841911tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.25100.00WP_063856081.1
CFHKNLOA_21596091596942aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
CFHKNLOA_224391944437satAstreptothricin N-acetyltransferase SatABLASTX91.91100.00WP_003242546.1
CFHKNLOA_216082963426rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.94100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
CFHKNLOA_21165363166004hlyIII0.0Hemolysin IIIExotoxin99.84100.00NP_390062
CFHKNLOA_22535396536577capB0.0CapsuleImmune modulation99.75100.00NP_391471
CFHKNLOA_22948521949306dhbA0.0BacillibactinNutritional/Metabolic factor99.62100.00NP_391080
CFHKNLOA_22537060538202capA0.0CapsuleImmune modulation99.47100.00NP_391469
CFHKNLOA_22536592537041capC0.0CapsuleImmune modulation99.33100.00NP_391470
CFHKNLOA_22952204953142dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
CFHKNLOA_22949332950528dhbC0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391079
CFHKNLOA_211068912452dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
CFHKNLOA_22953162960298dhbF0.0BacillibactinNutritional/Metabolic factor98.77100.00NP_391076
CFHKNLOA_22950557952176dhbE0.0BacillibactinNutritional/Metabolic factor98.03100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
CFHKNLOA_63189033026tufA0.0elongation factor Tu84.9695.69AHM69299
CFHKNLOA_201602015151pdxS1.48e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
CFHKNLOA_199284393619CodY3.30e-125nutrient-responsive regulator81.08100.00ACJ80679
CFHKNLOA_22697926697357ClpP6.39e-99part of proteolytic complex81.0597.44BAB94595
CFHKNLOA_18373136372744spxA14.15e-70redox-responsive transcription factor83.97100.00AAF21893
CFHKNLOA_18373136372744spx2.48e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
CFHKNLOA_122326623508SpoVG7.89e-39RNA-binding protein81.4879.41AAT02994
CFHKNLOA_16142299142496CspA9.76e-32cold shock protein90.91100.00CAA62903
CFHKNLOA_18616299616493CspB5.99e-27cold shock protein83.0898.48CAD00094