Genome ID:GCA_015999565.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1244.58

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
DBDCODJJ_1539385540434clbAARO:3002814clbA100.00100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
DBDCODJJ_1539385540420cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
DBDCODJJ_1539385540431clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbAEXACTX100.00100.00WP_012116915.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
DBDCODJJ_134244743425655capB0.0CapsuleImmune modulation81.9699.66NP_391471
DBDCODJJ_134240103424459capC3.12e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
DBDCODJJ_1133507134643tufA0.0elongation factor Tu86.8195.69AHM69299
DBDCODJJ_11872019589pdxS3.27e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
DBDCODJJ_116004461601222CodY4.63e-124nutrient-responsive regulator81.08100.00ACJ80679
DBDCODJJ_130624833061611lipA (SAUSA300_0829)1.26e-161lipoic acid synthetase80.8295.41ABD22039