Genome ID:GCA_016411915.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
HBJADMOB_12624063625232bmrARO:3003007bmr99.74100.00M33768.1
HBJADMOB_12453920455122bltARO:3003006blt100.00100.00L32599.1
HBJADMOB_12435523436377aadKARO:3002627aadK97.89100.00AL009126.1
HBJADMOB_22188814190460vmlRARO:3004476vmlR98.54100.18NC_000964.3
HBJADMOB_23137260137853tmrBARO:3003059tmrB97.97100.00AL009126.3
HBJADMOB_238673588174lmrBARO:3002813lmrB99.16100.42JYFL01000006.1
HBJADMOB_237392174841mphKARO:3004541mphK98.69100.00CP010314.1
HBJADMOB_194270843025ykkDARO:3003064ykkD99.05100.00AL009126.1
HBJADMOB_194237042708ykkCARO:3003063ykkC100.00100.00AL009126.1
HBJADMOB_212719429764Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
HBJADMOB_13617537551tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline99.93100.00X08034
HBJADMOB_237392174841mph(K)Spiramycin, Telithromycin99.02100.00NC_000964
HBJADMOB_12435523436375aadKStreptomycin98.5999.77M26879

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
HBJADMOB_13617537548tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
HBJADMOB_237392174838mphKmacrolide 2'-phosphotransferase MphKBLASTX98.69100.00WP_003246254.1
HBJADMOB_22188817190460vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
HBJADMOB_12435523436374aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
HBJADMOB_13950440022satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
HBJADMOB_12929833932430rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.40100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
HBJADMOB_1508407509588capB0.0CapsuleImmune modulation99.83100.00NP_391471
HBJADMOB_12823974824615hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
HBJADMOB_1930683931468dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
HBJADMOB_1934366935304dhbB0.0BacillibactinNutritional/Metabolic factor99.47100.00NP_391077
HBJADMOB_1935324942460dhbF0.0BacillibactinNutritional/Metabolic factor99.31100.00NP_391076
HBJADMOB_1510071511213capA0.0CapsuleImmune modulation99.21100.00NP_391469
HBJADMOB_1509603510052capC0.0CapsuleImmune modulation99.11100.00NP_391470
HBJADMOB_1931494932690dhbC0.0BacillibactinNutritional/Metabolic factor99.00100.00NP_391079
HBJADMOB_12977504979267dep/capD0.0CapsuleImmune modulation98.92100.00NP_389723
HBJADMOB_1932719934338dhbE0.0BacillibactinNutritional/Metabolic factor98.89100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
HBJADMOB_23167332809tufA0.0elongation factor Tu84.9695.69AHM69299
HBJADMOB_542295098pdxS1.10e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
HBJADMOB_19352754353530CodY4.44e-125nutrient-responsive regulator81.08100.00ACJ80679
HBJADMOB_1663541662972ClpP6.28e-99part of proteolytic complex81.0597.44BAB94595
HBJADMOB_20274732275124spxA12.45e-70redox-responsive transcription factor83.97100.00AAF21893
HBJADMOB_20274732275124spx1.46e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
HBJADMOB_32047720719SpoVG7.47e-39RNA-binding protein81.4879.41AAT02994
HBJADMOB_22141995142192CspA9.47e-32cold shock protein90.91100.00CAA62903
HBJADMOB_203151131317CspB3.53e-27cold shock protein83.0898.48CAD00094