Genome ID:GCA_016742875.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3023.61

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
BHNGKDIG_4479509326tet(L)ARO:3000179tet(L)99.13100.00M11036.1
BHNGKDIG_4458157740tet(M)ARO:3000186tet(M)98.44100.31AB039845.1
BHNGKDIG_35113598lnuAARO:3002835lnuA97.52100.00M14039.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
BHNGKDIG_4479509326tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline99.78100.00M29725
BHNGKDIG_4458157740tet(M)Doxycycline, Tetracycline, Minocycline98.96100.00AM990992
BHNGKDIG_35113598lnu(A)Lincomycin98.77100.00M14039

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
BHNGKDIG_35113595lnu(A)lincosamide nucleotidyltransferase Lnu(A)EXACTX100.00100.00WP_001829870.1
BHNGKDIG_4479509323tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX99.34100.00WP_001574277.1
BHNGKDIG_4458157737tet(M)tetracycline resistance ribosomal protection protein Tet(M)BLASTX99.06100.00WP_000691727.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
BHNGKDIG_162785727150WalR3.24e-116transcriptional regulatory protein85.59100.43EPH95667
BHNGKDIG_239566295465CspR8.07e-28cold shock protein80.30100.00AAO82613
BHNGKDIG_239566295468CspA2.67e-27cold shock protein81.5498.48CAA62903