Genome ID:GCA_017360005.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BOEKKPFG_1 | 1179103 | 1179972 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| BOEKKPFG_1 | 1178510 | 1179103 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| BOEKKPFG_1 | 1420099 | 1420908 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.88 | 100.00 | WP_002948020 |
| BOEKKPFG_1 | 1178510 | 1179103 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BOEKKPFG_1 | 1420892 | 1421848 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_011226328 |
| BOEKKPFG_1 | 1421845 | 1422993 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.74 | 100.00 | WP_041828290 |
| BOEKKPFG_1 | 1178510 | 1179103 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| BOEKKPFG_1 | 1426489 | 1427340 | rfbD | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_014621820 |
| BOEKKPFG_1 | 902922 | 904580 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| BOEKKPFG_1 | 1418894 | 1420099 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226326 |
| BOEKKPFG_1 | 43695 | 44534 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| BOEKKPFG_1 | 1423102 | 1424112 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226330 |
| BOEKKPFG_1 | 1416038 | 1417822 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.44 | 100.00 | WP_011226325 |
| BOEKKPFG_1 | 1417819 | 1418874 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.43 | 100.00 | WP_002948022 |
| BOEKKPFG_1 | 1216357 | 1217118 | srtA | 0.0 | Sortase A | Exoenzyme | 98.82 | 100.00 | - |
| BOEKKPFG_1 | 1000809 | 1002224 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 98.59 | 100.00 | WP_011681165 |
| BOEKKPFG_1 | 1082066 | 1082859 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.36 | 100.25 | - |
| BOEKKPFG_1 | 1013216 | 1013947 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.36 | 100.00 | WP_011226048 |
| BOEKKPFG_1 | 1013216 | 1013947 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 98.09 | 100.00 | WP_011681176 |
| BOEKKPFG_1 | 1013216 | 1013947 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 97.68 | 100.00 | WP_011227248 |
| BOEKKPFG_1 | 1424115 | 1425386 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.48 | 99.76 | WP_011226331 |
| BOEKKPFG_1 | 1013948 | 1015408 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.47 | 100.00 | WP_011681177 |
| BOEKKPFG_1 | 1011765 | 1012505 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 97.17 | 100.00 | WP_011226046 |
| BOEKKPFG_1 | 1013948 | 1015408 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 97.12 | 100.21 | WP_011226049 |
| BOEKKPFG_1 | 1013948 | 1015408 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 96.99 | 100.21 | WP_041827043 |
| BOEKKPFG_1 | 1011765 | 1012505 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 96.76 | 100.00 | WP_011681174 |
| BOEKKPFG_1 | 1011770 | 1012505 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 96.20 | 98.13 | WP_011227246 |
| BOEKKPFG_1 | 1012515 | 1013207 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011227247 |
| BOEKKPFG_1 | 1012515 | 1013207 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011226047 |
| BOEKKPFG_1 | 1010341 | 1011708 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 95.39 | 100.00 | WP_011226045 |
| BOEKKPFG_1 | 1010343 | 1011708 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 94.14 | 99.85 | WP_011681173 |
| BOEKKPFG_1 | 1012515 | 1013207 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011681175 |
| BOEKKPFG_1 | 637121 | 638424 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| BOEKKPFG_1 | 1716651 | 1717661 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 86.54 | 99.41 | WP_002986042 |
| BOEKKPFG_1 | 152236 | 153519 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.65 | 99.77 | WP_000107753 |
| BOEKKPFG_1 | 1177035 | 1178081 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOEKKPFG_1 | 1219805 | 1220788 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BOEKKPFG_1 | 745444 | 746517 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BOEKKPFG_1 | 553436 | 554404 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BOEKKPFG_1 | 1593481 | 1595784 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.84 | 99.22 | AAK74619 |
| BOEKKPFG_1 | 1309169 | 1310650 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.31 | 100.00 | ABJ54480 |
| BOEKKPFG_1 | 776530 | 778776 | metE | 0.0 | methionine biosynthesis enzymes | 91.72 | 100.00 | AAK74738 |
| BOEKKPFG_1 | 72303 | 73301 | recA | 0.0 | DNA recombination and repair | 91.29 | 85.82 | AAL00560 |
| BOEKKPFG_1 | 27212 | 28183 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BOEKKPFG_1 | 1478469 | 1477318 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| BOEKKPFG_1 | 1442310 | 1440322 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.99 | 100.00 | AE014259_2 |
| BOEKKPFG_1 | 1202545 | 1200815 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 87.87 | 100.00 | AAK34199 |
| BOEKKPFG_1 | 1923925 | 1922447 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| BOEKKPFG_1 | 637121 | 638422 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BOEKKPFG_1 | 1908737 | 1906845 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| BOEKKPFG_1 | 781701 | 779992 | PGM | 0.0 | phosphoglucomutase | 83.71 | 99.65 | ACH87041 |
| BOEKKPFG_1 | 1759018 | 1760028 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BOEKKPFG_1 | 930994 | 929633 | mnmE | 0.0 | central tRNA-modifying GTPase | 82.24 | 99.56 | ABP90420 |
| BOEKKPFG_1 | 1812122 | 1810230 | PepO | 0.0 | endopeptidase | 80.19 | 100.00 | ABF32980 |
| BOEKKPFG_1 | 622686 | 623576 | bglB | 1.39e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| BOEKKPFG_1 | 844875 | 843937 | SP_0676 | 4.79e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| BOEKKPFG_1 | 778968 | 779825 | metF | 1.60e-164 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| BOEKKPFG_1 | 1054373 | 1053669 | covR | 4.57e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| BOEKKPFG_1 | 1267977 | 1267306 | rr01 | 3.14e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| BOEKKPFG_1 | 1054373 | 1053669 | walR | 1.93e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| BOEKKPFG_1 | 312399 | 313085 | CovR | 1.05e-117 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BOEKKPFG_1 | 785655 | 786323 | CiaR | 2.11e-117 | two-component response regulator | 84.31 | 99.55 | AAK74935 |
| BOEKKPFG_1 | 785655 | 786326 | ciaR | 2.08e-115 | two component system response regulator | 82.14 | 99.12 | AIK75708 |
| BOEKKPFG_1 | 73577 | 73951 | SpxA2 | 1.20e-69 | transcriptional regulator | 91.20 | 94.70 | ERL21461 |
| BOEKKPFG_1 | 942352 | 942753 | SpxA1 | 3.93e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BOEKKPFG_1 | 153677 | 154177 | RopE (M5005_Spy_1611) | 5.14e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| BOEKKPFG_1 | 1593481 | 1595778 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.81 | 98.08 | MYN69560 |
| BOEKKPFG_1 | 1797650 | 1796631 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 96.47 | 100.00 | ABJ55451 |