Genome ID：GCA_017367105.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	25	33	41.40

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
GEEKONHA_16	19511	20380	rfbA	0.0	Capsule	Immune modulation	100.00	100.00	WP_011681286
GEEKONHA_16	20380	20973	STER_RS06030	0.0	Capsule	Immune modulation	100.00	100.00	WP_011226149
GEEKONHA_3	130835	131644	STU_RS16245	0.0	Capsule	Immune modulation	99.88	100.00	WP_002948020
GEEKONHA_16	20380	20973	STR_RS05880	0.0	Capsule	Immune modulation	99.83	100.00	WP_011226149
GEEKONHA_3	129895	130851	STU_RS16250	0.0	Capsule	Immune modulation	99.79	100.00	WP_011226328
GEEKONHA_3	128750	129898	STU_RS16255	0.0	Capsule	Immune modulation	99.74	100.00	WP_041828290
GEEKONHA_16	20380	20973	STU_RS15260	0.0	Capsule	Immune modulation	99.66	100.00	WP_011226149
GEEKONHA_3	124403	125254	rfbD	0.0	Capsule	Immune modulation	99.65	100.00	WP_014621820
GEEKONHA_24	1514	3172	fbp54	0.0	FBPs	Adherence	99.58	100.00	WP_011227179
GEEKONHA_3	131644	132849	STU_RS16240	0.0	Capsule	Immune modulation	99.58	100.00	WP_011226326
GEEKONHA_3	127631	128641	STU_RS16260	0.0	Capsule	Immune modulation	99.50	100.00	WP_011226330
GEEKONHA_3	133921	135705	STU_RS16230	0.0	Capsule	Immune modulation	99.44	100.00	WP_011226325
GEEKONHA_3	132869	133924	STU_RS16235	0.0	Capsule	Immune modulation	99.43	100.00	WP_002948022
GEEKONHA_43	59241	60209	cbpD	0.0	Autolysin	Exoenzyme	98.86	100.00	WP_082302295
GEEKONHA_9	30295	31056	srtA	0.0	Sortase A	Exoenzyme	98.82	100.00	-
GEEKONHA_19	13398	14813	STER_RS05250	0.0	Capsule	Immune modulation	98.59	100.00	WP_011681165
GEEKONHA_17	992	1785	cshA	0.0	Cell surface hydrophobicity proteins	Adherence	98.36	100.25	-
GEEKONHA_19	1675	2406	STU_RS14645	0.0	Capsule	Immune modulation	98.36	100.00	WP_011226048
GEEKONHA_19	1675	2406	STER_RS05315	0.0	Capsule	Immune modulation	98.09	100.00	WP_011681176
GEEKONHA_19	1675	2406	STR_RS05260	0.0	Capsule	Immune modulation	97.68	100.00	WP_011227248
GEEKONHA_3	126357	127628	STU_RS16265	0.0	Capsule	Immune modulation	97.48	99.76	WP_011226331
GEEKONHA_19	214	1674	STER_RS05320	0.0	Capsule	Immune modulation	97.47	100.00	WP_011681177
GEEKONHA_19	3117	3857	STU_RS14635	0.0	Capsule	Immune modulation	97.17	100.00	WP_011226046
GEEKONHA_19	214	1674	STU_RS14650	0.0	Capsule	Immune modulation	97.12	100.21	WP_011226049
GEEKONHA_19	214	1674	STR_RS05265	0.0	Capsule	Immune modulation	96.99	100.21	WP_041827043
GEEKONHA_19	3117	3857	STER_RS05305	0.0	Capsule	Immune modulation	96.76	100.00	WP_011681174
GEEKONHA_19	3117	3852	STR_RS05250	0.0	Capsule	Immune modulation	96.20	98.13	WP_011227246
GEEKONHA_19	2415	3107	STR_RS05255	0.0	Capsule	Immune modulation	95.40	99.86	WP_011227247
GEEKONHA_19	2415	3107	STU_RS14640	0.0	Capsule	Immune modulation	95.40	99.86	WP_011226047
GEEKONHA_19	3914	5281	STU_RS14630	0.0	Capsule	Immune modulation	95.39	100.00	WP_011226045
GEEKONHA_19	3914	5279	STER_RS05300	0.0	Capsule	Immune modulation	94.14	99.85	WP_011681173
GEEKONHA_19	2415	3107	STER_RS05310	0.0	Capsule	Immune modulation	89.47	100.00	WP_011681175
GEEKONHA_41	33928	35231	eno	0.0	Streptococcal enolase	Exoenzyme	88.10	99.46	WP_000022832
GEEKONHA_56	14970	15980	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	86.54	99.41	WP_002986042
GEEKONHA_53	63720	65003	tig/ropA	0.0	Trigger factor	Stress survival	80.65	99.77	WP_000107753
GEEKONHA_16	21402	22448	rfbB	0.0	Capsule	Immune modulation	80.61	100.00	WP_009659423

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
GEEKONHA_9	27608	26625	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	94.82	100.00	AAK75326
GEEKONHA_38	14075	13002	MntE	0.0	manganese homeostasis	94.41	99.72	ABF32167
GEEKONHA_41	118916	117948	spr0084	0.0	pathogenitcity related	93.19	98.48	AAK98888
GEEKONHA_2	15666	13363	pfl2(Sp_0459)	0.0	formate acetyltransferase	92.84	99.22	AAK74619
GEEKONHA_8	13173	11692	SPD_0310	0.0	UPF0371 protein SPD_0310	92.31	100.00	ABJ54480
GEEKONHA_37	12918	10672	metE	0.0	methionine biosynthesis enzymes	91.72	100.00	AAK74738
GEEKONHA_57	2026	1028	recA	0.0	DNA recombination and repair	91.29	85.82	AAL00560
GEEKONHA_58	28669	27698	prsA2	0.0	ribose-phosphate pyrophosphokinase	90.12	100.00	ABF36968
GEEKONHA_3	73274	74425	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.32	99.74	AAL00050
GEEKONHA_3	109433	111421	uvrB	0.0	excinuclease ABC, B subunit	88.99	100.00	AE014259_2
GEEKONHA_10	12773	14503	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	87.87	100.00	AAK34199
GEEKONHA_1	28642	30120	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.42	100.00	ADE32434
GEEKONHA_41	35231	33930	Eno	0.0	enolase	86.21	99.77	ABP90468
GEEKONHA_1	43829	45721	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	86.05	98.90	ABP91129
GEEKONHA_37	7747	9456	PGM	0.0	phosphoglucomutase	83.71	99.65	ACH87041
GEEKONHA_45	2109	1099	pdh	0.0	pyruvate dehydrogenase	83.09	99.70	ABP91006
GEEKONHA_22	68928	70289	mnmE	0.0	central tRNA-modifying GTPase	82.24	99.56	ABP90420
GEEKONHA_23	26126	28018	PepO	0.0	endopeptidase	80.19	100.00	ABF32980
GEEKONHA_41	49666	48776	bglB	9.81e-180	putative phospho--glucosidase	88.89	99.66	AAK33487
GEEKONHA_27	43973	44911	SP_0676	6.01e-169	transcription facot	81.15	97.20	AAK74821
GEEKONHA_37	10480	9623	metF	1.41e-166	methionine biosynthesis enzymes	86.36	99.31	AAK74739
GEEKONHA_17	29478	30182	covR	8.25e-133	responder protein	85.53	100.00	AAK71319
GEEKONHA_8	54365	55036	rr01	1.20e-125	response regulator	83.93	99.56	CAB54566
GEEKONHA_17	29478	30182	walR	3.47e-123	DNA-binding response regulator	82.13	100.00	ANC99504
GEEKONHA_49	9616	8930	CovR	1.37e-119	serves to repress GAS virulence factor-encoding genes	80.79	100.00	ACE75886
GEEKONHA_37	3793	3125	CiaR	3.21e-119	two-component response regulator	84.31	99.55	AAK74935
GEEKONHA_37	3793	3122	ciaR	3.16e-117	two component system response regulator	82.14	99.12	AIK75708
GEEKONHA_57	752	378	SpxA2	9.01e-72	transcriptional regulator	91.20	94.70	ERL21461
GEEKONHA_22	57570	57169	SpxA1	1.90e-67	transcriptional regulator	80.60	100.00	ERL19273
GEEKONHA_47	25604	25317	spr0479	3.00e-49	essential gene	86.46	98.97	AAK99283
GEEKONHA_43	18352	18098	spr1327	1.11e-45	essential gene	95.29	100.00	AAL00131
GEEKONHA_1	86418	86155	spr0175	4.61e-42	pathogenitcity related	84.09	100.00	AAK98979
GEEKONHA_1	85591	85325	spr0177	8.14e-34	essential gene	84.27	88.12	AAK98981
GEEKONHA_53	63562	63062	RopE (M5005_Spy_1611)	1.86e-76	probable DNA-directed RNA polymerase subunit delta	81.44	87.43	AAK34603
GEEKONHA_2	15666	13369	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	82.81	98.08	MYN69560
GEEKONHA_23	40598	41617	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	96.47	100.00	ABJ55451