Genome ID:GCA_017367225.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 25 | 29 | 38.29 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| BJOMJGKA_1 | 1138358 | 1139227 | rfbA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011681286 |
| BJOMJGKA_1 | 1137765 | 1138358 | STER_RS06030 | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | WP_011226149 |
| BJOMJGKA_1 | 1137765 | 1138358 | STR_RS05880 | 0.0 | Capsule | Immune modulation | 99.83 | 100.00 | WP_011226149 |
| BJOMJGKA_1 | 1353317 | 1354273 | STU_RS16250 | 0.0 | Capsule | Immune modulation | 99.79 | 100.00 | WP_011226328 |
| BJOMJGKA_1 | 1352524 | 1353333 | STU_RS16245 | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | WP_002948020 |
| BJOMJGKA_1 | 1137765 | 1138358 | STU_RS15260 | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | WP_011226149 |
| BJOMJGKA_1 | 1354270 | 1355418 | STU_RS16255 | 0.0 | Capsule | Immune modulation | 99.65 | 100.00 | WP_041828290 |
| BJOMJGKA_1 | 904079 | 905737 | fbp54 | 0.0 | FBPs | Adherence | 99.58 | 100.00 | WP_011227179 |
| BJOMJGKA_1 | 1351319 | 1352524 | STU_RS16240 | 0.0 | Capsule | Immune modulation | 99.58 | 100.00 | WP_011226326 |
| BJOMJGKA_1 | 1348463 | 1350247 | STU_RS16230 | 0.0 | Capsule | Immune modulation | 99.55 | 100.00 | WP_011226325 |
| BJOMJGKA_1 | 1358914 | 1359765 | rfbD | 0.0 | Capsule | Immune modulation | 99.53 | 100.00 | WP_014621820 |
| BJOMJGKA_1 | 43703 | 44542 | cbpD | 0.0 | Autolysin | Exoenzyme | 99.52 | 100.00 | WP_011226733 |
| BJOMJGKA_1 | 1355527 | 1356537 | STU_RS16260 | 0.0 | Capsule | Immune modulation | 99.50 | 100.00 | WP_011226330 |
| BJOMJGKA_1 | 1350244 | 1351299 | STU_RS16235 | 0.0 | Capsule | Immune modulation | 99.43 | 100.00 | WP_002948022 |
| BJOMJGKA_1 | 1016284 | 1017015 | STER_RS05315 | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | WP_011681176 |
| BJOMJGKA_1 | 1016284 | 1017015 | STU_RS14645 | 0.0 | Capsule | Immune modulation | 98.77 | 100.00 | WP_011226048 |
| BJOMJGKA_1 | 1016284 | 1017015 | STR_RS05260 | 0.0 | Capsule | Immune modulation | 98.63 | 100.00 | WP_011227248 |
| BJOMJGKA_1 | 1082871 | 1083659 | cshA | 0.0 | Cell surface hydrophobicity proteins | Adherence | 98.36 | 99.75 | - |
| BJOMJGKA_1 | 1006343 | 1007758 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 97.81 | 100.00 | WP_011681165 |
| BJOMJGKA_1 | 1174550 | 1175311 | srtA | 0.0 | Sortase A | Exoenzyme | 97.64 | 100.00 | - |
| BJOMJGKA_1 | 1356540 | 1357811 | STU_RS16265 | 0.0 | Capsule | Immune modulation | 97.48 | 99.76 | WP_011226331 |
| BJOMJGKA_1 | 1017016 | 1018476 | STER_RS05320 | 0.0 | Capsule | Immune modulation | 97.47 | 100.00 | WP_011681177 |
| BJOMJGKA_1 | 1017016 | 1018476 | STU_RS14650 | 0.0 | Capsule | Immune modulation | 96.85 | 100.21 | WP_011226049 |
| BJOMJGKA_1 | 1017016 | 1018476 | STR_RS05265 | 0.0 | Capsule | Immune modulation | 95.89 | 100.21 | WP_041827043 |
| BJOMJGKA_1 | 1015583 | 1016275 | STR_RS05255 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011227247 |
| BJOMJGKA_1 | 1015583 | 1016275 | STU_RS14640 | 0.0 | Capsule | Immune modulation | 95.40 | 99.86 | WP_011226047 |
| BJOMJGKA_1 | 1013393 | 1014758 | STER_RS05300 | 0.0 | Capsule | Immune modulation | 95.17 | 99.85 | WP_011681173 |
| BJOMJGKA_1 | 1014815 | 1015573 | STER_RS05305 | 0.0 | Capsule | Immune modulation | 93.94 | 100.94 | WP_011681174 |
| BJOMJGKA_1 | 1013391 | 1014758 | STU_RS14630 | 0.0 | Capsule | Immune modulation | 93.93 | 100.00 | WP_011226045 |
| BJOMJGKA_1 | 1014815 | 1015573 | STU_RS14635 | 0.0 | Capsule | Immune modulation | 93.81 | 100.94 | WP_011226046 |
| BJOMJGKA_1 | 1014820 | 1015573 | STR_RS05250 | 0.0 | Capsule | Immune modulation | 93.24 | 99.07 | WP_011227246 |
| BJOMJGKA_1 | 1015583 | 1016275 | STER_RS05310 | 0.0 | Capsule | Immune modulation | 89.47 | 100.00 | WP_011681175 |
| BJOMJGKA_1 | 640615 | 641918 | eno | 0.0 | Streptococcal enolase | Exoenzyme | 88.10 | 99.46 | WP_000022832 |
| BJOMJGKA_1 | 1648876 | 1649886 | plr/gapA | 0.0 | Streptococcal plasmin receptor/GAPDH | Adherence | 87.45 | 99.90 | WP_002986042 |
| BJOMJGKA_1 | 160749 | 162032 | tig/ropA | 0.0 | Trigger factor | Stress survival | 80.73 | 99.77 | WP_000107753 |
| BJOMJGKA_1 | 1136290 | 1137336 | rfbB | 0.0 | Capsule | Immune modulation | 80.61 | 100.00 | WP_009659423 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BJOMJGKA_1 | 1177998 | 1178981 | ldh(Sp_1220) | 0.0 | L-lactate dehydrogenase | 94.82 | 100.00 | AAK75326 |
| BJOMJGKA_1 | 744203 | 745276 | MntE | 0.0 | manganese homeostasis | 94.41 | 99.72 | ABF32167 |
| BJOMJGKA_1 | 557216 | 558184 | spr0084 | 0.0 | pathogenitcity related | 93.19 | 98.48 | AAK98888 |
| BJOMJGKA_1 | 1525854 | 1528157 | pfl2(Sp_0459) | 0.0 | formate acetyltransferase | 92.97 | 99.22 | AAK74619 |
| BJOMJGKA_1 | 1253363 | 1254844 | SPD_0310 | 0.0 | UPF0371 protein SPD_0310 | 92.31 | 100.00 | ABJ54480 |
| BJOMJGKA_1 | 780647 | 782893 | metE | 0.0 | methionine biosynthesis enzymes | 91.99 | 100.00 | AAK74738 |
| BJOMJGKA_1 | 65890 | 66882 | recA | 0.0 | DNA recombination and repair | 91.24 | 85.31 | AAL00560 |
| BJOMJGKA_1 | 27219 | 28190 | prsA2 | 0.0 | ribose-phosphate pyrophosphokinase | 90.12 | 100.00 | ABF36968 |
| BJOMJGKA_1 | 1412068 | 1410917 | potA | 0.0 | ABC transporter ATP-binding protein-spermidine/putrescine transport | 89.32 | 99.74 | AAL00050 |
| BJOMJGKA_1 | 1375056 | 1373068 | uvrB | 0.0 | excinuclease ABC, B subunit | 88.99 | 100.00 | AE014259_2 |
| BJOMJGKA_1 | 1161802 | 1160072 | ptsI | 0.0 | phosphoenolpyruvate-protein phosphotransferase | 88.04 | 100.00 | AAK34199 |
| BJOMJGKA_1 | 1856870 | 1855392 | IMPDH | 0.0 | inosine-5'-monophosphate dehydrogenase | 87.42 | 100.00 | ADE32434 |
| BJOMJGKA_1 | 640615 | 641916 | Eno | 0.0 | enolase | 86.21 | 99.77 | ABP90468 |
| BJOMJGKA_1 | 1841679 | 1839787 | gidA | 0.0 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme | 86.05 | 98.90 | ABP91129 |
| BJOMJGKA_1 | 785818 | 784109 | PGM | 0.0 | phosphoglucomutase | 83.89 | 99.65 | ACH87041 |
| BJOMJGKA_1 | 1692546 | 1693556 | pdh | 0.0 | pyruvate dehydrogenase | 83.09 | 99.70 | ABP91006 |
| BJOMJGKA_1 | 930030 | 928669 | mnmE | 0.0 | central tRNA-modifying GTPase | 81.80 | 99.56 | ABP90420 |
| BJOMJGKA_1 | 1744241 | 1742349 | PepO | 0.0 | endopeptidase | 80.03 | 100.00 | ABF32980 |
| BJOMJGKA_1 | 626180 | 627070 | bglB | 1.34e-178 | putative phospho--glucosidase | 88.89 | 99.66 | AAK33487 |
| BJOMJGKA_1 | 845184 | 844246 | SP_0676 | 2.59e-167 | transcription facot | 81.15 | 97.20 | AAK74821 |
| BJOMJGKA_1 | 783085 | 783942 | metF | 8.71e-165 | methionine biosynthesis enzymes | 86.36 | 99.31 | AAK74739 |
| BJOMJGKA_1 | 1055184 | 1054480 | covR | 4.41e-131 | responder protein | 85.53 | 100.00 | AAK71319 |
| BJOMJGKA_1 | 1234386 | 1233715 | rr01 | 3.03e-124 | response regulator | 83.93 | 99.56 | CAB54566 |
| BJOMJGKA_1 | 1055184 | 1054480 | walR | 1.86e-121 | DNA-binding response regulator | 82.13 | 100.00 | ANC99504 |
| BJOMJGKA_1 | 789772 | 790440 | CiaR | 9.48e-118 | two-component response regulator | 84.75 | 99.55 | AAK74935 |
| BJOMJGKA_1 | 315112 | 315798 | CovR | 1.01e-117 | serves to repress GAS virulence factor-encoding genes | 80.79 | 100.00 | ACE75886 |
| BJOMJGKA_1 | 789772 | 790443 | ciaR | 1.03e-115 | two component system response regulator | 82.59 | 99.12 | AIK75708 |
| BJOMJGKA_1 | 67194 | 67589 | SpxA2 | 3.21e-73 | transcriptional regulator | 90.15 | 100.00 | ERL21461 |
| BJOMJGKA_1 | 941389 | 941790 | SpxA1 | 3.79e-66 | transcriptional regulator | 80.60 | 100.00 | ERL19273 |
| BJOMJGKA_1 | 162190 | 162690 | RopE (M5005_Spy_1611) | 4.96e-75 | probable DNA-directed RNA polymerase subunit delta | 81.44 | 87.43 | AAK34603 |
| BJOMJGKA_1 | 1525854 | 1528151 | PFL (B9H01_RS01125) | 0.0 | formate C-acetyltransferase | 82.94 | 98.08 | MYN69560 |
| BJOMJGKA_1 | 1729832 | 1728813 | ilvC (SPD_0406) | 0.0 | ketol-acid reductoisomerase (NADP(+)) | 95.88 | 100.00 | ABJ55451 |