Genome ID:GCA_017592865.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2277.55

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GKHIEHDG_119263693685clbAARO:3002814clbA99.43100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GKHIEHDG_119263693671cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.0098.67KR610408
GKHIEHDG_24194658195598tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline85.3568.34X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GKHIEHDG_119263693682clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.43100.00WP_012116915.1
GKHIEHDG_15552331554925rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.11100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GKHIEHDG_27144296145477capB0.0CapsuleImmune modulation82.1299.66NP_391471
GKHIEHDG_27143832144281capC7.27e-115CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GKHIEHDG_53163632772tufA0.0elongation factor Tu86.8195.69AHM69299
GKHIEHDG_242675136pdxS1.34e-152encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
GKHIEHDG_15352699353475CodY8.20e-125nutrient-responsive regulator81.08100.00ACJ80679
GKHIEHDG_14254262254654spxA17.29e-70redox-responsive transcription factor83.21100.00AAF21893
GKHIEHDG_117512075317CspA8.34e-32cold shock protein90.91100.00CAA62903
GKHIEHDG_222259322787CspD5.49e-28cold shock protein80.0098.48CAC99957
GKHIEHDG_222259322790CspB1.14e-27cold shock protein80.30100.00CAD00094
GKHIEHDG_117512075314CspR1.09e-26cold shock protein80.0098.48AAO82613
GKHIEHDG_26130422129550lipA (SAUSA300_0829)1.15e-162lipoic acid synthetase80.8295.41ABD22039