Genome ID:GCA_017599395.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210918.03

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
LBGNKIHB_59362993946ykkDARO:3003064ykkD98.10100.00AL009126.1
LBGNKIHB_59329193629ykkCARO:3003063ykkC99.11100.00AL009126.1
LBGNKIHB_463961941058lmrBARO:3002813lmrB98.74100.42JYFL01000006.1
LBGNKIHB_493958342153Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
LBGNKIHB_503622937431bltARO:3003006blt100.00100.00L32599.1
LBGNKIHB_501781318667aadKARO:3002627aadK97.54100.00AL009126.1
LBGNKIHB_122912410293bmrARO:3003007bmr99.49100.00M33768.1
LBGNKIHB_7514902344aadKARO:3002627aadK88.03100.00AL009126.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
LBGNKIHB_283471236088tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.77100.00D12567
LBGNKIHB_501781318665aadKStreptomycin98.4899.77M26879
LBGNKIHB_39740998328mph(K)Spiramycin, Telithromycin97.6199.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
LBGNKIHB_283471236085tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_063856081.1
LBGNKIHB_352911930759vmlRABC-F type ribosomal protection protein VmlRINTERNAL_STOP97.62100.00WP_003234144.1
LBGNKIHB_501781318664aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
LBGNKIHB_283806338581satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
LBGNKIHB_7514902341aadKaminoglycoside 6-adenylyltransferase AadKBLASTX88.03100.00WP_003229862.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
LBGNKIHB_47102350103288dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
LBGNKIHB_6033364517capB0.0CapsuleImmune modulation99.66100.00NP_391471
LBGNKIHB_6017112853capA0.0CapsuleImmune modulation99.56100.00NP_391469
LBGNKIHB_6028723321capC0.0CapsuleImmune modulation99.56100.00NP_391470
LBGNKIHB_47106175106960dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
LBGNKIHB_174406845831dep/capD0.0CapsuleImmune modulation99.15100.00NP_389723
LBGNKIHB_4795194102330dhbF0.0BacillibactinNutritional/Metabolic factor98.78100.00NP_391076
LBGNKIHB_47104953106149dhbC0.0BacillibactinNutritional/Metabolic factor98.58100.00NP_391079
LBGNKIHB_58178174178815hlyIII0.0Hemolysin IIIExotoxin97.82100.00NP_390062
LBGNKIHB_47103316104935dhbE0.0BacillibactinNutritional/Metabolic factor97.78100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
LBGNKIHB_402813326997tufA0.0elongation factor Tu85.7595.69AHM69299
LBGNKIHB_7343565225pdxS1.97e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
LBGNKIHB_36241124241900CodY2.87e-125nutrient-responsive regulator81.08100.00ACJ80679
LBGNKIHB_804800448573ClpP1.04e-99part of proteolytic complex81.0597.44BAB94595
LBGNKIHB_73896738575spxA15.78e-71redox-responsive transcription factor83.97100.00AAF21893
LBGNKIHB_73896738575spx3.45e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
LBGNKIHB_453476034518SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
LBGNKIHB_8340874284CspA3.65e-33cold shock protein90.91100.00CAA62903
LBGNKIHB_58166322166128CspD5.23e-28cold shock protein80.0098.48CAC99957
LBGNKIHB_43048530291CspB9.30e-28cold shock protein83.0898.48CAD00094