Genome ID:GCA_017601115.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1010916.76

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
NGNDDPCD_1281691282545aadKARO:3002627aadK98.59100.00AL009126.1
NGNDDPCD_69177706179352vmlRARO:3004476vmlR98.54100.18NC_000964.3
NGNDDPCD_19845399622bmrARO:3003007bmr99.23100.00M33768.1
NGNDDPCD_76370364623mphKARO:3004541mphK97.39100.00CP010314.1
NGNDDPCD_75037151810lmrBARO:3002813lmrB98.53100.42JYFL01000006.1
NGNDDPCD_803948439801ykkDARO:3003064ykkD99.05100.00AL009126.1
NGNDDPCD_803914639484ykkCARO:3003063ykkC100.00100.00AL009126.1
NGNDDPCD_29816810738Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
NGNDDPCD_78531446tmrBARO:3003059tmrB98.98100.00AL009126.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
NGNDDPCD_1281691282545aadKStreptomycin98.71100.00M26879
NGNDDPCD_76370364623mph(K)Spiramycin, Telithromycin97.94100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
NGNDDPCD_1281694282545aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.59100.00WP_003229862.1
NGNDDPCD_69177709179352vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
NGNDDPCD_76370664623mphKmacrolide 2'-phosphotransferase MphKBLASTX97.39100.00WP_003246254.1
NGNDDPCD_830165613rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.17100.00WP_087347987.1
NGNDDPCD_363607536407satAstreptothricin N-acetyltransferase SatAPARTIALX92.7964.16WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
NGNDDPCD_5118197119378capB0.0CapsuleImmune modulation99.66100.00NP_391471
NGNDDPCD_91103686104471dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
NGNDDPCD_5119393119842capC0.0CapsuleImmune modulation99.33100.00NP_391470
NGNDDPCD_919269499830dhbF0.0BacillibactinNutritional/Metabolic factor99.27100.00NP_391076
NGNDDPCD_58116751117392hlyIII0.0Hemolysin IIIExotoxin99.22100.00NP_390062
NGNDDPCD_91102464103660dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
NGNDDPCD_67826680029dep/capD0.0CapsuleImmune modulation98.98100.00NP_389723
NGNDDPCD_5119861121003capA0.0CapsuleImmune modulation98.86100.00NP_391469
NGNDDPCD_9199850100788dhbB0.0BacillibactinNutritional/Metabolic factor98.83100.00NP_391077
NGNDDPCD_91100816102435dhbE0.0BacillibactinNutritional/Metabolic factor98.39100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NGNDDPCD_162802126885tufA0.0elongation factor Tu85.7595.69AHM69299
NGNDDPCD_411124710378pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
NGNDDPCD_26104960273CodY1.09e-125nutrient-responsive regulator81.08100.00ACJ80679
NGNDDPCD_149746496895ClpP1.85e-99part of proteolytic complex81.0597.44BAB94595
NGNDDPCD_115139651788spxA15.11e-71redox-responsive transcription factor83.97100.00AAF21893
NGNDDPCD_115139651788spx3.05e-69essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
NGNDDPCD_192047820720SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
NGNDDPCD_69135259135456CspA8.11e-32cold shock protein90.91100.00CAA62903
NGNDDPCD_58104791104597CspD1.17e-28cold shock protein81.5498.48CAC99957
NGNDDPCD_25191405191599CspB2.05e-27cold shock protein83.0898.48CAD00094