Genome ID:GCA_017603845.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
MKEKHDDM_1587186588235clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
MKEKHDDM_1587186588221cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.8098.67KR610408
MKEKHDDM_127426592744035tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline86.78100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
MKEKHDDM_1587186588232clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
MKEKHDDM_127426652744035tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX86.6599.78WP_003242953.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
MKEKHDDM_136741853675366capB0.0CapsuleImmune modulation81.8799.66NP_391471
MKEKHDDM_136737213674170capC3.31e-115CapsuleImmune modulation83.8199.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MKEKHDDM_1133523134659tufA0.0elongation factor Tu86.8195.69AHM69299
MKEKHDDM_11862019489pdxS3.48e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
MKEKHDDM_116550521655828CodY4.92e-124nutrient-responsive regulator81.08100.00ACJ80679
MKEKHDDM_132669163266044lipA (SAUSA300_0829)1.34e-161lipoic acid synthetase80.8295.41ABD22039