Genome ID：GCA_018122465.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
12	10	9	18.03

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
ALMECFFD_95	122054	122647	tmrB	ARO:3003059	tmrB	97.97	100.00	AL009126.3
ALMECFFD_12	108838	109155	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
ALMECFFD_12	108500	108838	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
ALMECFFD_95	71494	72933	lmrB	ARO:3002813	lmrB	98.95	100.42	JYFL01000006.1
ALMECFFD_3	59292	60461	bmr	ARO:3003007	bmr	99.74	100.00	M33768.1
ALMECFFD_95	58679	59599	mphK	ARO:3004541	mphK	99.02	100.00	CP010314.1
ALMECFFD_56	47408	49051	vmlR	ARO:3004476	vmlR	98.35	100.00	NC_000964.3
ALMECFFD_69	27368	29938	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
ALMECFFD_4	5176	6030	aadK	ARO:3002627	aadK	98.59	100.00	AL009126.1
ALMECFFD_25	2128	3330	blt	ARO:3003006	blt	99.75	100.00	L32599.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
ALMECFFD_4	5178	6030	aadK	Streptomycin	99.30	99.77	M26879
ALMECFFD_95	58679	59599	mph(K)	Spiramycin, Telithromycin	98.70	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
ALMECFFD_95	58679	59596	mphK	macrolide 2'-phosphotransferase MphK	BLASTX	99.02	100.00	WP_003246254.1
ALMECFFD_4	5179	6030	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.59	100.00	WP_003229862.1
ALMECFFD_56	47411	49051	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	98.35	100.00	WP_003234144.1
ALMECFFD_27	5369	5887	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.75	100.00	WP_003242546.1
ALMECFFD_38	60695	63292	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.83	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
ALMECFFD_38	10156	11919	dep/capD	0.0	Capsule	Immune modulation	100.00	100.00	NP_389723
ALMECFFD_9	20308	21246	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
ALMECFFD_9	18661	20280	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.81	100.00	NP_391078
ALMECFFD_9	16625	17410	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	99.75	100.00	NP_391080
ALMECFFD_99	30675	31316	hlyIII	0.0	Hemolysin III	Exotoxin	99.69	100.00	NP_390062
ALMECFFD_97	24692	25873	capB	0.0	Capsule	Immune modulation	99.66	100.00	NP_391471
ALMECFFD_97	25888	26337	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
ALMECFFD_9	17436	18632	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.33	100.00	NP_391079
ALMECFFD_97	26356	27498	capA	0.0	Capsule	Immune modulation	99.30	100.00	NP_391469
ALMECFFD_9	21266	28402	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.24	100.00	NP_391076

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
ALMECFFD_18	31691	32827	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
ALMECFFD_20	4269	5138	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
ALMECFFD_93	191396	190620	CodY	2.31e-125	nutrient-responsive regulator	81.08	100.00	ACJ80679
ALMECFFD_100	234241	234810	ClpP	1.62e-99	part of proteolytic complex	81.05	97.44	BAB94595
ALMECFFD_41	37418	37026	spxA1	2.38e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
ALMECFFD_41	37418	37026	spx	1.42e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
ALMECFFD_35	34772	34530	SpoVG	6.14e-39	RNA-binding protein	81.48	79.41	AAT02994
ALMECFFD_57	862	665	CspA	2.08e-33	cold shock protein	90.91	100.00	CAA62903
ALMECFFD_99	43277	43471	CspD	1.05e-28	cold shock protein	81.54	98.48	CAC99957
ALMECFFD_42	34675	34869	CspB	6.23e-28	cold shock protein	83.08	98.48	CAD00094