Genome ID:GCA_018122475.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310918.71

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
MLEOMEED_58143349144203aadKARO:3002627aadK100.00100.00AL009126.1
MLEOMEED_906817469613lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
MLEOMEED_1023827139914vmlRARO:3004476vmlR100.00100.00NC_000964.3
MLEOMEED_901851719110tmrBARO:3003059tmrB100.00100.00AL009126.3
MLEOMEED_9170129582Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
MLEOMEED_2743065475bmrARO:3003007bmr99.74100.00M33768.1
MLEOMEED_1941054422ykkDARO:3003064ykkD100.00100.00AL009126.1
MLEOMEED_1937674105ykkCARO:3003063ykkC100.00100.00AL009126.1
MLEOMEED_1023883590bltARO:3003006blt100.00100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
MLEOMEED_58143349144203aadKStreptomycin100.00100.00M26879
MLEOMEED_382481624tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline100.00100.00X08034
MLEOMEED_908150882429mph(K)Spiramycin, Telithromycin99.89100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
MLEOMEED_58143349144200aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
MLEOMEED_8783368854satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
MLEOMEED_382511624tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
MLEOMEED_1023827139911vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
MLEOMEED_1455668160rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1
MLEOMEED_908180982429mphKmacrolide 2'-phosphotransferase MphKPARTIALX98.5567.65WP_003246254.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
MLEOMEED_961850519647capA0.0CapsuleImmune modulation100.00100.00NP_391469
MLEOMEED_961684118022capB0.0CapsuleImmune modulation100.00100.00NP_391471
MLEOMEED_961803718486capC0.0CapsuleImmune modulation100.00100.00NP_391470
MLEOMEED_1013021031973dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
MLEOMEED_84106891dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
MLEOMEED_40194618195259hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
MLEOMEED_84474711883dhbF0.0BacillibactinNutritional/Metabolic factor99.99100.00NP_391076
MLEOMEED_8437894727dhbB0.0BacillibactinNutritional/Metabolic factor99.89100.00NP_391077
MLEOMEED_849172113dhbC0.0BacillibactinNutritional/Metabolic factor99.67100.00NP_391079
MLEOMEED_8421423761dhbE0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
MLEOMEED_73194833084tufA0.0elongation factor Tu84.9695.69AHM69299
MLEOMEED_641124610377pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
MLEOMEED_829119391969CodY7.42e-126nutrient-responsive regulator81.08100.00ACJ80679
MLEOMEED_992991429345ClpP6.31e-100part of proteolytic complex81.0597.44BAB94595
MLEOMEED_211630716699spxA13.40e-70redox-responsive transcription factor83.21100.00AAF21893
MLEOMEED_153459534353SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
MLEOMEED_1028538685189CspA3.75e-32cold shock protein90.91100.00CAA62903
MLEOMEED_40182656182462CspD1.60e-28cold shock protein81.5498.48CAC99957
MLEOMEED_9382768082CspB2.01e-27cold shock protein83.0898.48CAD00094