Genome ID:GCA_018122535.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310918.71

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
AGNKOGBN_91192220193389bmrARO:3003007bmr99.74100.00M33768.1
AGNKOGBN_77127370127963tmrBARO:3003059tmrB100.00100.00AL009126.3
AGNKOGBN_469430796877Bacillus subtilis mprFARO:3003324Bsub_mprF100.00100.00AL009126.3
AGNKOGBN_777686778306lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
AGNKOGBN_776405264972mphKARO:3004541mphK100.00100.00CP010314.1
AGNKOGBN_952946731110vmlRARO:3004476vmlR100.00100.00NC_000964.3
AGNKOGBN_702092521263ykkCARO:3003063ykkC100.00100.00AL009126.1
AGNKOGBN_702060820925ykkDARO:3003064ykkD100.00100.00AL009126.1
AGNKOGBN_1189989852aadKARO:3002627aadK100.00100.00AL009126.1
AGNKOGBN_2967627964bltARO:3003006blt100.00100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
AGNKOGBN_1189989852aadKStreptomycin100.00100.00M26879
AGNKOGBN_776405264972mph(K)Spiramycin, Telithromycin100.00100.00NC_000964
AGNKOGBN_221154812924tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline100.00100.00X08034

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
AGNKOGBN_1189989849aadKaminoglycoside 6-adenylyltransferase AadKEXACTX100.00100.00WP_003229862.1
AGNKOGBN_776405264969mphKmacrolide 2'-phosphotransferase MphKEXACTX100.00100.00WP_003246254.1
AGNKOGBN_2290309548satAstreptothricin N-acetyltransferase SatAEXACTX100.00100.00WP_003242546.1
AGNKOGBN_221155112924tet(L)tetracycline efflux MFS transporter Tet(L)EXACTX100.00100.00WP_003242953.1
AGNKOGBN_952946731107vmlRABC-F type ribosomal protection protein VmlREXACTX100.00100.00WP_003234144.1
AGNKOGBN_8431945788rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.1599.88WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
AGNKOGBN_699160592747capA0.0CapsuleImmune modulation100.00100.00NP_391469
AGNKOGBN_698994191122capB0.0CapsuleImmune modulation100.00100.00NP_391471
AGNKOGBN_699113791586capC0.0CapsuleImmune modulation100.00100.00NP_391470
AGNKOGBN_353706838831dep/capD0.0CapsuleImmune modulation100.00100.00NP_389723
AGNKOGBN_54172004172789dhbA0.0BacillibactinNutritional/Metabolic factor100.00100.00NP_391080
AGNKOGBN_1613852026hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
AGNKOGBN_54176645183781dhbF0.0BacillibactinNutritional/Metabolic factor99.99100.00NP_391076
AGNKOGBN_54175687176625dhbB0.0BacillibactinNutritional/Metabolic factor99.89100.00NP_391077
AGNKOGBN_54172815174011dhbC0.0BacillibactinNutritional/Metabolic factor99.67100.00NP_391079
AGNKOGBN_54174040175659dhbE0.0BacillibactinNutritional/Metabolic factor99.57100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
AGNKOGBN_863186433000tufA0.0elongation factor Tu84.9695.69AHM69299
AGNKOGBN_531114110272pdxS1.12e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
AGNKOGBN_32292404293180CodY2.38e-125nutrient-responsive regulator81.08100.00ACJ80679
AGNKOGBN_17120934120365ClpP1.20e-99part of proteolytic complex81.0597.44BAB94595
AGNKOGBN_873731136919spxA14.68e-70redox-responsive transcription factor83.21100.00AAF21893
AGNKOGBN_73468634444SpoVG7.52e-39RNA-binding protein81.4879.41AAT02994
AGNKOGBN_9214541651CspA6.07e-34cold shock protein90.91100.00CAA62903
AGNKOGBN_9154775671CspD1.56e-28cold shock protein81.5498.48CAC99957
AGNKOGBN_263315732963CspB6.25e-28cold shock protein83.0898.48CAD00094