Genome ID:GCA_018223605.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
3234.69

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
IPCAFADI_1550413551462clbAARO:3002814clbA92.26100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
IPCAFADI_1550413551462cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin89.14100.00KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
IPCAFADI_1550413551459clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX92.26100.00WP_012116915.1
IPCAFADI_1547425547943satAstreptothricin N-acetyltransferase SatABLASTX84.97100.00WP_003242546.1
IPCAFADI_117527761755373rphCrifamycin-inactivating phosphotransferase RphCBLASTX81.29100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
IPCAFADI_133937903394971capB0.0CapsuleImmune modulation82.0499.66NP_391471
IPCAFADI_133933263393775capC1.43e-113CapsuleImmune modulation83.5999.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
IPCAFADI_1133405134541tufA0.0elongation factor Tu86.5495.69AHM69299
IPCAFADI_11862719496pdxS5.88e-150encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
IPCAFADI_115455051546281CodY3.19e-124nutrient-responsive regulator81.08100.00ACJ80679