Genome ID:GCA_018224865.2 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310416.88

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
OCBCHABP_124665702467424aadKARO:3002627aadK97.89100.00AL009126.1
OCBCHABP_124369762438178bltARO:3003006blt99.00100.00L32599.1
OCBCHABP_122672172268386bmrARO:3003007bmr99.49100.00M33768.1
OCBCHABP_112971361297453ykkDARO:3003064ykkD98.10100.00AL009126.1
OCBCHABP_112967981297136ykkCARO:3003063ykkC98.21100.00AL009126.1
OCBCHABP_1843851846421Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
OCBCHABP_1541090542733vmlRARO:3004476vmlR98.54100.00NC_000964.3
OCBCHABP_1287331287924tmrBARO:3003059tmrB97.46100.00AL009126.3
OCBCHABP_1236775238208lmrBARO:3002813lmrB100.00100.00JYFL01000006.1
OCBCHABP_1223965224885mphKARO:3004541mphK96.41100.00CP010314.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
OCBCHABP_124665702467424aadKStreptomycin98.48100.00M26879
OCBCHABP_139865063987882tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.47100.00D12567
OCBCHABP_1223965224885mph(K)Spiramycin, Telithromycin96.6499.89NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
OCBCHABP_139865093987882tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_063856081.1
OCBCHABP_1541093542733vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
OCBCHABP_124665732467424aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.89100.00WP_003229862.1
OCBCHABP_1223965224882mphKmacrolide 2'-phosphotransferase MphKBLASTX96.41100.00WP_003246254.1
OCBCHABP_139839553984473satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1
OCBCHABP_119716441974241rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
OCBCHABP_134970043498185capB0.0CapsuleImmune modulation99.83100.00NP_391471
OCBCHABP_130707543071539dhbA0.0BacillibactinNutritional/Metabolic factor99.75100.00NP_391080
OCBCHABP_120678772068518hlyIII0.0Hemolysin IIIExotoxin99.53100.00NP_390062
OCBCHABP_134965403496989capC0.0CapsuleImmune modulation99.33100.00NP_391470
OCBCHABP_134953793496521capA0.0CapsuleImmune modulation99.21100.00NP_391469
OCBCHABP_130695323070728dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
OCBCHABP_119221691923932dep/capD0.0CapsuleImmune modulation98.58100.00NP_389723
OCBCHABP_130597623066898dhbF0.0BacillibactinNutritional/Metabolic factor98.57100.00NP_391076
OCBCHABP_130669183067856dhbB0.0BacillibactinNutritional/Metabolic factor98.51100.00NP_391077
OCBCHABP_130678843069503dhbE0.0BacillibactinNutritional/Metabolic factor98.46100.00NP_391078

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
OCBCHABP_1102257103393tufA0.0elongation factor Tu85.7595.69AHM69299
OCBCHABP_142335102pdxS4.15e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
OCBCHABP_116084211609197CodY3.27e-124nutrient-responsive regulator81.08100.00ACJ80679
OCBCHABP_133356943336263ClpP2.42e-98part of proteolytic complex81.0597.44BAB94595