Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 1 | 7.07 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFGGMHAI_1 | 5040665 | 5042590 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| HFGGMHAI_1 | 1164255 | 1165118 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| HFGGMHAI_1 | 1162943 | 1164079 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| HFGGMHAI_1 | 1161606 | 1162745 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| HFGGMHAI_1 | 1144492 | 1146417 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HFGGMHAI_1 | 1144492 | 1146417 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| HFGGMHAI_1 | 1162913 | 1164079 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| HFGGMHAI_1 | 1160499 | 1161300 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.75 | 100.00 | M62487 |
| HFGGMHAI_1 | 2579085 | 2580035 | cfxA4 | Unknown Beta-lactam | 86.12 | 98.34 | AY769933 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HFGGMHAI_1 | 1164255 | 1165115 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| HFGGMHAI_1 | 1162913 | 1164076 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| HFGGMHAI_1 | 1161606 | 1162742 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| HFGGMHAI_1 | 1144495 | 1146417 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| HFGGMHAI_1 | 5040665 | 5042587 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| HFGGMHAI_1 | 2579084 | 2580037 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | BLASTX | 83.65 | 99.07 | WP_057280848.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HFGGMHAI_1 | 1832561 | 1834141 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |