Genome ID:GCA_018454405.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 4 | 16.88 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBNBHHHA_1 | 2735288 | 2736139 | aadK | ARO:3002627 | aadK | 98.24 | 99.65 | AL009126.1 |
| HBNBHHHA_1 | 2716589 | 2717791 | blt | ARO:3003006 | blt | 99.25 | 100.00 | L32599.1 |
| HBNBHHHA_1 | 2494292 | 2495461 | bmr | ARO:3003007 | bmr | 99.49 | 100.00 | M33768.1 |
| HBNBHHHA_1 | 1376670 | 1376987 | ykkD | ARO:3003064 | ykkD | 98.10 | 100.00 | AL009126.1 |
| HBNBHHHA_1 | 1376332 | 1376670 | ykkC | ARO:3003063 | ykkC | 98.21 | 100.00 | AL009126.1 |
| HBNBHHHA_1 | 916678 | 919248 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.77 | 100.00 | AL009126.3 |
| HBNBHHHA_1 | 604651 | 606291 | vmlR | ARO:3004476 | vmlR | 98.50 | 99.82 | NC_000964.3 |
| HBNBHHHA_1 | 339087 | 339680 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| HBNBHHHA_1 | 288628 | 290061 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.00 | JYFL01000006.1 |
| HBNBHHHA_1 | 275815 | 276735 | mphK | ARO:3004541 | mphK | 98.68 | 100.00 | CP010314.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HBNBHHHA_1 | 4187198 | 4188574 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| HBNBHHHA_1 | 2735288 | 2736139 | aadK | Streptomycin | 98.48 | 99.65 | M26879 |
| HBNBHHHA_1 | 275815 | 276735 | mph(K) | Spiramycin, Telithromycin | 98.05 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBNBHHHA_1 | 4187201 | 4188574 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| HBNBHHHA_1 | 275815 | 276723 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.68 | 99.02 | WP_003246254.1 |
| HBNBHHHA_1 | 2735291 | 2736139 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.24 | 100.00 | WP_003229862.1 |
| HBNBHHHA_1 | 604654 | 606291 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 96.89 | 99.82 | WP_003234144.1 |
| HBNBHHHA_1 | 4184680 | 4185198 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 91.91 | 100.00 | WP_003242546.1 |
| HBNBHHHA_1 | 2050988 | 2053585 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.48 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| HBNBHHHA_1 | 3698938 | 3700119 | capB | 0.0 | Capsule | Immune modulation | 99.66 | 100.00 | NP_391471 |
| HBNBHHHA_1 | 3291026 | 3291811 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.49 | 100.00 | NP_391080 |
| HBNBHHHA_1 | 3697313 | 3698455 | capA | 0.0 | Capsule | Immune modulation | 99.30 | 100.00 | NP_391469 |
| HBNBHHHA_1 | 3289804 | 3291000 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.00 | 100.00 | NP_391079 |
| HBNBHHHA_1 | 2004391 | 2006154 | dep/capD | 0.0 | Capsule | Immune modulation | 98.98 | 100.00 | NP_389723 |
| HBNBHHHA_1 | 3287190 | 3288128 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.94 | 100.00 | NP_391077 |
| HBNBHHHA_1 | 2294942 | 2295583 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 98.91 | 100.00 | NP_390062 |
| HBNBHHHA_1 | 3698474 | 3698923 | capC | 0.0 | Capsule | Immune modulation | 98.89 | 100.00 | NP_391470 |
| HBNBHHHA_1 | 3280034 | 3287170 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.67 | 100.00 | NP_391076 |
| HBNBHHHA_1 | 3288156 | 3289775 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 96.73 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HBNBHHHA_1 | 132886 | 134022 | tufA | 0.0 | elongation factor Tu | 85.75 | 95.69 | AHM69299 |
| HBNBHHHA_1 | 19073 | 19942 | pdxS | 3.13e-149 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| HBNBHHHA_1 | 1689873 | 1690649 | CodY | 3.42e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| HBNBHHHA_1 | 3545758 | 3546327 | ClpP | 2.53e-98 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |