Genome ID：GCA_018599045.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
0	20	35	40.31

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
No hit found

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
No hit found

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
LKGFLNNG_69	18565	19416	rfbD	0.0	Capsule	Immune modulation	95.31	100.00	WP_014621820
LKGFLNNG_26	1845	2576	STER_RS05315	0.0	Capsule	Immune modulation	94.67	100.00	WP_011681176
LKGFLNNG_26	1845	2576	STU_RS14645	0.0	Capsule	Immune modulation	94.40	100.00	WP_011226048
LKGFLNNG_26	1845	2576	STR_RS05260	0.0	Capsule	Immune modulation	93.99	100.00	WP_011227248
LKGFLNNG_69	24744	26500	STU_RS16230	0.0	Capsule	Immune modulation	92.94	98.43	WP_011226325
LKGFLNNG_69	20738	21694	STU_RS16250	0.0	Capsule	Immune modulation	92.48	100.00	WP_011226328
LKGFLNNG_69	21678	22487	STU_RS16245	0.0	Capsule	Immune modulation	92.23	99.88	WP_002948020
LKGFLNNG_69	22487	23692	STU_RS16240	0.0	Capsule	Immune modulation	92.21	100.00	WP_011226326
LKGFLNNG_69	19593	20741	STU_RS16255	0.0	Capsule	Immune modulation	91.56	99.91	WP_041828290
LKGFLNNG_69	23713	24747	STU_RS16235	0.0	Capsule	Immune modulation	91.10	99.15	WP_002948022
LKGFLNNG_58	24474	25067	STR_RS05880	0.0	Capsule	Immune modulation	91.08	100.00	WP_011226149
LKGFLNNG_26	384	1844	STER_RS05320	0.0	Capsule	Immune modulation	90.92	99.86	WP_011681177
LKGFLNNG_58	24474	25067	STER_RS06030	0.0	Capsule	Immune modulation	90.91	100.00	WP_011226149
LKGFLNNG_58	24474	25067	STU_RS15260	0.0	Capsule	Immune modulation	90.91	100.00	WP_011226149
LKGFLNNG_26	384	1844	STU_RS14650	0.0	Capsule	Immune modulation	90.78	100.00	WP_011226049
LKGFLNNG_41	37534	39192	fbp54	0.0	FBPs	Adherence	90.54	99.94	WP_011227179
LKGFLNNG_26	384	1844	STR_RS05265	0.0	Capsule	Immune modulation	89.97	100.00	WP_041827043
LKGFLNNG_26	2585	3277	STU_RS14640	0.0	Capsule	Immune modulation	89.90	100.00	WP_011226047
LKGFLNNG_26	2585	3277	STR_RS05255	0.0	Capsule	Immune modulation	89.61	100.00	WP_011227247
LKGFLNNG_26	2585	3277	STER_RS05310	0.0	Capsule	Immune modulation	89.47	100.00	WP_011681175
LKGFLNNG_80	33406	34709	eno	0.0	Streptococcal enolase	Exoenzyme	88.24	99.54	WP_000022832
LKGFLNNG_101	24722	25561	cbpD	0.0	Autolysin	Exoenzyme	87.87	99.88	WP_011226733
LKGFLNNG_63	120	1133	plr/gapA	0.0	Streptococcal plasmin receptor/GAPDH	Adherence	85.67	99.90	WP_002986042
LKGFLNNG_54	11200	11961	srtA	0.0	Sortase A	Exoenzyme	83.88	99.87	-
LKGFLNNG_58	25337	26383	rfbB	0.0	Capsule	Immune modulation	83.49	99.90	WP_002263087
LKGFLNNG_62	11970	13253	tig/ropA	0.0	Trigger factor	Stress survival	80.61	99.61	WP_000107753
LKGFLNNG_58	23605	24474	rfbA	0.0	Capsule	Immune modulation	80.28	99.77	WP_002904719
LKGFLNNG_26	3287	3957	STU_RS14635	2.72e-148	Capsule	Immune modulation	80.98	90.28	WP_011226046
LKGFLNNG_26	3287	3957	STER_RS05305	1.27e-146	Capsule	Immune modulation	80.83	90.28	WP_011681174
LKGFLNNG_26	3287	3889	STR_RS05250	1.28e-136	Capsule	Immune modulation	81.46	80.13	WP_011227246

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
LKGFLNNG_54	8510	7527	ldh(Sp_1220)	0.0	L-lactate dehydrogenase	96.95	100.00	AAK75326
LKGFLNNG_54	20095	21168	MntE	0.0	manganese homeostasis	96.09	99.72	ABF32167
LKGFLNNG_79	2526	4832	pfl2(Sp_0459)	0.0	formate acetyltransferase	94.41	99.22	AAK74619
LKGFLNNG_36	5745	7226	SPD_0310	0.0	UPF0371 protein SPD_0310	92.92	100.00	ABJ54480
LKGFLNNG_131	71214	72182	spr0084	0.0	pathogenitcity related	92.88	98.48	AAK98888
LKGFLNNG_41	170557	168311	metE	0.0	methionine biosynthesis enzymes	92.79	100.00	AAK74738
LKGFLNNG_40	36359	35388	prsA2	0.0	ribose-phosphate pyrophosphokinase	91.67	100.00	ABF36968
LKGFLNNG_17	4152	10625	PrtA	0.0	serine protease	91.44	100.61	ABJ55268
LKGFLNNG_66	9588	11318	ptsI	0.0	phosphoenolpyruvate-protein phosphotransferase	89.95	100.00	AAK34199
LKGFLNNG_69	4933	6921	uvrB	0.0	excinuclease ABC, B subunit	89.74	100.00	AE014259_2
LKGFLNNG_20	44646	45797	potA	0.0	ABC transporter ATP-binding protein-spermidine/putrescine transport	89.58	99.74	AAL00050
LKGFLNNG_10	7291	8769	IMPDH	0.0	inosine-5'-monophosphate dehydrogenase	87.83	100.00	ADE32434
LKGFLNNG_80	34709	33408	Eno	0.0	enolase	86.44	99.77	ABP90468
LKGFLNNG_10	23071	24963	gidA	0.0	tRNA uridine 5-carboxymethylaminomethyl modification enzyme	85.58	98.90	ABP91129
LKGFLNNG_40	1211	120	recA	0.0	DNA recombination and repair	84.91	95.36	AAL00560
LKGFLNNG_41	165393	167102	PGM	0.0	phosphoglucomutase	84.76	99.65	ACH87041
LKGFLNNG_41	23380	24741	mnmE	0.0	central tRNA-modifying GTPase	82.89	99.56	ABP90420
LKGFLNNG_111	19528	20538	pdh	0.0	pyruvate dehydrogenase	82.79	99.70	ABP91006
LKGFLNNG_80	49119	48229	bglB	3.77e-178	putative phospho--glucosidase	87.20	99.66	AAK33487
LKGFLNNG_41	168121	167264	metF	5.98e-170	methionine biosynthesis enzymes	87.76	99.31	AAK74739
LKGFLNNG_41	123855	124793	SP_0676	1.24e-168	transcription facot	81.47	97.20	AAK74821
LKGFLNNG_91	74693	73836	mtsA	1.24e-151	substrate-binding lipoprotein of manganese transporter	80.14	92.86	AIK76191
LKGFLNNG_55	2301	3005	covR	1.06e-127	responder protein	85.53	100.00	AAK71319
LKGFLNNG_8	9487	8816	rr01	1.64e-127	response regulator	84.82	99.56	CAB54566
LKGFLNNG_41	160728	160057	ciaR	1.73e-125	two component system response regulator	86.16	99.12	AIK75708
LKGFLNNG_41	160728	160060	CiaR	3.20e-125	two-component response regulator	87.44	99.55	AAK74935
LKGFLNNG_55	2301	3005	walR	2.40e-121	DNA-binding response regulator	82.13	100.00	ANC99504
LKGFLNNG_22	10780	11466	CovR	3.93e-121	serves to repress GAS virulence factor-encoding genes	82.10	100.00	ACE75886
LKGFLNNG_93	726	331	SpxA2	1.17e-84	transcriptional regulator	91.67	100.00	ERL21461
LKGFLNNG_41	11922	11521	SpxA1	1.15e-69	transcriptional regulator	82.09	100.00	ERL19273
LKGFLNNG_43	33256	33669	GrpE	3.10e-68	protein grpE	81.88	80.59	ABP89267
LKGFLNNG_22	33985	34272	spr0479	1.25e-48	essential gene	85.42	98.97	AAK99283
LKGFLNNG_131	37553	37807	spr1327	2.67e-46	essential gene	94.12	100.00	AAL00131
LKGFLNNG_10	54250	53987	spr0175	3.45e-43	pathogenitcity related	85.23	100.00	AAK98979
LKGFLNNG_10	53425	53159	spr0177	7.65e-42	essential gene	83.15	88.12	AAK98981
LKGFLNNG_62	11803	11312	RopE (M5005_Spy_1611)	7.13e-74	probable DNA-directed RNA polymerase subunit delta	82.93	85.86	AAK34603
LKGFLNNG_79	2526	4826	PFL (B9H01_RS01125)	0.0	formate C-acetyltransferase	83.22	98.08	MYN69560
LKGFLNNG_111	55658	54639	ilvC (SPD_0406)	0.0	ketol-acid reductoisomerase (NADP(+))	85.88	100.00	ABJ55451