Genome ID:GCA_018603605.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310918.71

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PANJDFEL_11630940631278ykkCARO:3003063ykkC100.00100.00AL009126.1
PANJDFEL_11630623630940ykkDARO:3003064ykkD99.05100.00AL009126.1
PANJDFEL_14167601168770bmrARO:3003007bmr99.74100.00M33768.1
PANJDFEL_23108041108961mphKARO:3004541mphK97.71100.00CP010314.1
PANJDFEL_239470896147lmrBARO:3002813lmrB99.37100.42JYFL01000006.1
PANJDFEL_234507645669tmrBARO:3003059tmrB100.00100.00AL009126.3
PANJDFEL_33299533849aadKARO:3002627aadK98.24100.00AL009126.1
PANJDFEL_222880730450vmlRARO:3004476vmlR98.54100.00NC_000964.3
PANJDFEL_12727929849Bacillus subtilis mprFARO:3003324Bsub_mprF99.77100.00AL009126.3
PANJDFEL_31433415536bltARO:3003006blt99.25100.00L32599.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PANJDFEL_43624737623tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.84100.00X08034
PANJDFEL_33299733849aadKStreptomycin98.7199.77M26879
PANJDFEL_23108041108961mph(K)Spiramycin, Telithromycin97.72100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PANJDFEL_43624737620tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_003242953.1
PANJDFEL_222880730447vmlRABC-F type ribosomal protection protein VmlRBLASTX98.54100.00WP_003234144.1
PANJDFEL_33299833849aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.24100.00WP_003229862.1
PANJDFEL_23108044108961mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
PANJDFEL_43957640094satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
PANJDFEL_14463765466362rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.60100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PANJDFEL_14369575370216hlyIII0.0Hemolysin IIIExotoxin99.69100.00NP_390062
PANJDFEL_1676458583dhbB0.0BacillibactinNutritional/Metabolic factor99.68100.00NP_391077
PANJDFEL_16452268453449capB0.0CapsuleImmune modulation99.66100.00NP_391471
PANJDFEL_16861110230dhbE0.0BacillibactinNutritional/Metabolic factor99.26100.00NP_391078
PANJDFEL_161148112266dhbA0.0BacillibactinNutritional/Metabolic factor99.24100.00NP_391080
PANJDFEL_16450643451785capA0.0CapsuleImmune modulation98.95100.00NP_391469
PANJDFEL_161025911455dhbC0.0BacillibactinNutritional/Metabolic factor98.91100.00NP_391079
PANJDFEL_14511530513293dep/capD0.0CapsuleImmune modulation98.87100.00NP_389723
PANJDFEL_164897625dhbF0.0BacillibactinNutritional/Metabolic factor98.82100.00NP_391076
PANJDFEL_16451804452253capC0.0CapsuleImmune modulation98.67100.00NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PANJDFEL_53169332829tufA0.0elongation factor Tu84.9695.69AHM69299
PANJDFEL_121148010611pdxS1.13e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
PANJDFEL_11321078320302CodY5.45e-125nutrient-responsive regulator81.08100.00ACJ80679
PANJDFEL_16310851311420ClpP2.81e-99part of proteolytic complex81.0597.44BAB94595
PANJDFEL_21109946109554spxA12.46e-70redox-responsive transcription factor83.97100.00AAF21893
PANJDFEL_21109946109554spx1.47e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
PANJDFEL_63463334391SpoVG7.49e-39RNA-binding protein81.4879.41AAT02994
PANJDFEL_227718176984CspA9.28e-32cold shock protein90.91100.00CAA62903
PANJDFEL_14357613357419CspD3.96e-28cold shock protein81.5498.48CAC99957
PANJDFEL_21353192353386CspB3.55e-27cold shock protein83.0898.48CAD00094