Genome ID:GCA_018603715.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 9 | 18.71 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DMACJMHG_65 | 107823 | 108743 | mphK | ARO:3004541 | mphK | 100.00 | 100.00 | CP010314.1 |
| DMACJMHG_65 | 94489 | 95928 | lmrB | ARO:3002813 | lmrB | 99.79 | 100.42 | JYFL01000006.1 |
| DMACJMHG_65 | 44832 | 45425 | tmrB | ARO:3003059 | tmrB | 100.00 | 100.00 | AL009126.3 |
| DMACJMHG_60 | 29094 | 30737 | vmlR | ARO:3004476 | vmlR | 100.00 | 100.00 | NC_000964.3 |
| DMACJMHG_98 | 28910 | 31480 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 100.00 | 100.00 | AL009126.3 |
| DMACJMHG_56 | 21337 | 21675 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| DMACJMHG_56 | 21020 | 21337 | ykkD | ARO:3003064 | ykkD | 100.00 | 100.00 | AL009126.1 |
| DMACJMHG_89 | 8998 | 9852 | aadK | ARO:3002627 | aadK | 100.00 | 100.00 | AL009126.1 |
| DMACJMHG_104 | 2194 | 3363 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| DMACJMHG_92 | 886 | 2088 | blt | ARO:3003006 | blt | 100.00 | 100.00 | L32599.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DMACJMHG_89 | 8998 | 9852 | aadK | Streptomycin | 100.00 | 100.00 | M26879 |
| DMACJMHG_65 | 107823 | 108743 | mph(K) | Spiramycin, Telithromycin | 100.00 | 100.00 | NC_000964 |
| DMACJMHG_18 | 435 | 1811 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DMACJMHG_89 | 8998 | 9849 | aadK | aminoglycoside 6-adenylyltransferase AadK | EXACTX | 100.00 | 100.00 | WP_003229862.1 |
| DMACJMHG_65 | 107826 | 108743 | mphK | macrolide 2'-phosphotransferase MphK | EXACTX | 100.00 | 100.00 | WP_003246254.1 |
| DMACJMHG_116 | 1575 | 2093 | satA | streptothricin N-acetyltransferase SatA | EXACTX | 100.00 | 100.00 | WP_003242546.1 |
| DMACJMHG_18 | 438 | 1811 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| DMACJMHG_60 | 29094 | 30734 | vmlR | ABC-F type ribosomal protection protein VmlR | EXACTX | 100.00 | 100.00 | WP_003234144.1 |
| DMACJMHG_91 | 14465 | 17059 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.15 | 99.88 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| DMACJMHG_109 | 88620 | 89762 | capA | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391469 |
| DMACJMHG_109 | 86956 | 88137 | capB | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391471 |
| DMACJMHG_109 | 88152 | 88601 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| DMACJMHG_75 | 6619 | 8382 | dep/capD | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_389723 |
| DMACJMHG_63 | 26691 | 27476 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391080 |
| DMACJMHG_63 | 22855 | 23793 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391077 |
| DMACJMHG_63 | 25469 | 26665 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391079 |
| DMACJMHG_63 | 23821 | 25440 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391078 |
| DMACJMHG_63 | 15699 | 22835 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 100.00 | 100.00 | NP_391076 |
| DMACJMHG_97 | 7214 | 7855 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DMACJMHG_71 | 15589 | 14453 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| DMACJMHG_105 | 4286 | 5155 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| DMACJMHG_76 | 25776 | 25000 | CodY | 1.12e-125 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| DMACJMHG_131 | 68633 | 69202 | ClpP | 5.91e-100 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| DMACJMHG_20 | 94043 | 93651 | spxA1 | 2.26e-70 | redox-responsive transcription factor | 83.21 | 100.00 | AAF21893 |
| DMACJMHG_113 | 1821 | 1579 | SpoVG | 1.64e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| DMACJMHG_118 | 8879 | 8682 | CspA | 4.62e-33 | cold shock protein | 90.91 | 100.00 | CAA62903 |
| DMACJMHG_87 | 103003 | 102809 | CspD | 6.42e-29 | cold shock protein | 81.54 | 98.48 | CAC99957 |
| DMACJMHG_69 | 17381 | 17187 | CspB | 4.74e-28 | cold shock protein | 83.08 | 98.48 | CAD00094 |