Genome ID：GCA_018603725.1

Potential risk score of uploaded strain

ARGs	VFs	PGs	PPRS
13	10	9	18.71

CARD

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
CJHAPIJD_52	131870	132463	tmrB	ARO:3003059	tmrB	100.00	100.00	AL009126.3
CJHAPIJD_3	112470	112787	ykkD	ARO:3003064	ykkD	99.05	100.00	AL009126.1
CJHAPIJD_3	112132	112470	ykkC	ARO:3003063	ykkC	100.00	100.00	AL009126.1
CJHAPIJD_52	81345	82784	lmrB	ARO:3002813	lmrB	99.16	100.42	JYFL01000006.1
CJHAPIJD_41	79366	80535	bmr	ARO:3003007	bmr	99.49	100.00	M33768.1
CJHAPIJD_52	68530	69396	mphK	ARO:3004541	mphK	98.61	94.12	CP010314.1
CJHAPIJD_17	41368	42996	vmlR	ARO:3004476	vmlR	99.08	99.09	NC_000964.3
CJHAPIJD_61	27402	29972	Bacillus subtilis mprF	ARO:3003324	Bsub_mprF	99.88	100.00	AL009126.3
CJHAPIJD_33	13699	14553	aadK	ARO:3002627	aadK	98.94	100.00	AL009126.1
CJHAPIJD_55	2353	3555	blt	ARO:3003006	blt	99.25	100.00	L32599.1

Resfinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
CJHAPIJD_33	13701	14553	aadK	Streptomycin	98.94	99.77	M26879
CJHAPIJD_26	30168	31544	tet(L)	Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline	98.91	100.00	D12567
CJHAPIJD_52	68530	69450	mph(K)	Spiramycin, Telithromycin	98.05	100.00	NC_000964

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
CJHAPIJD_17	41371	42996	vmlR	ABC-F type ribosomal protection protein VmlR	BLASTX	99.08	98.90	WP_003234144.1
CJHAPIJD_33	13702	14553	aadK	aminoglycoside 6-adenylyltransferase AadK	BLASTX	98.94	100.00	WP_003229862.1
CJHAPIJD_26	30168	31541	tet(L)	tetracycline efflux MFS transporter Tet(L)	BLASTX	98.91	100.00	WP_063856081.1
CJHAPIJD_52	68530	69447	mphK	macrolide 2'-phosphotransferase MphK	INTERNAL_STOP	98.04	100.00	WP_003246254.1
CJHAPIJD_26	33497	34015	satA	streptothricin N-acetyltransferase SatA	BLASTX	90.17	100.00	WP_003242546.1
CJHAPIJD_16	60854	63442	rphC	rifamycin-inactivating phosphotransferase RphC	BLASTX	80.37	100.00	WP_087347987.1

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
CJHAPIJD_32	35715	36500	dhbA	0.0	Bacillibactin	Nutritional/Metabolic factor	100.00	100.00	NP_391080
CJHAPIJD_32	24723	31859	dhbF	0.0	Bacillibactin	Nutritional/Metabolic factor	99.99	100.00	NP_391076
CJHAPIJD_32	31879	32817	dhbB	0.0	Bacillibactin	Nutritional/Metabolic factor	99.89	100.00	NP_391077
CJHAPIJD_31	25777	26958	capB	0.0	Capsule	Immune modulation	99.75	100.00	NP_391471
CJHAPIJD_32	32845	34464	dhbE	0.0	Bacillibactin	Nutritional/Metabolic factor	99.57	100.00	NP_391078
CJHAPIJD_31	26973	27422	capC	0.0	Capsule	Immune modulation	99.56	100.00	NP_391470
CJHAPIJD_32	34493	35689	dhbC	0.0	Bacillibactin	Nutritional/Metabolic factor	99.50	100.00	NP_391079
CJHAPIJD_63	54501	55142	hlyIII	0.0	Hemolysin III	Exotoxin	99.22	100.00	NP_390062
CJHAPIJD_31	27441	28583	capA	0.0	Capsule	Immune modulation	99.21	100.00	NP_391469
CJHAPIJD_16	6473	8236	dep/capD	0.0	Capsule	Immune modulation	98.92	100.00	NP_389723

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
CJHAPIJD_24	31886	33022	tufA	0.0	elongation factor Tu	84.96	95.69	AHM69299
CJHAPIJD_45	4286	5155	pdxS	1.10e-151	encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS	83.79	98.31	ACE61268
CJHAPIJD_5	870	94	CodY	7.64e-126	nutrient-responsive regulator	81.08	100.00	ACJ80679
CJHAPIJD_19	234508	235077	ClpP	2.16e-99	part of proteolytic complex	81.05	97.44	BAB94595
CJHAPIJD_64	110843	111235	spxA1	9.39e-71	redox-responsive transcription factor	83.97	100.00	AAF21893
CJHAPIJD_64	110843	111235	spx	5.60e-69	essential gene which is a thiol/oxidative stress sensor	80.15	100.00	BAB57159
CJHAPIJD_29	20568	20810	SpoVG	7.50e-39	RNA-binding protein	81.48	79.41	AAT02994
CJHAPIJD_39	11556	11359	CspA	8.63e-33	cold shock protein	90.91	100.00	CAA62903
CJHAPIJD_63	67106	67300	CspD	9.54e-29	cold shock protein	81.54	98.48	CAC99957
CJHAPIJD_65	31860	31666	CspB	1.35e-27	cold shock protein	83.08	98.48	CAD00094