Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 6 | 1 | 4 | 7.28 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNODPCNG_21 | 597824 | 598669 | Erm(34) | ARO:3000600 | Erm(34) | 96.80 | 100.00 | AY234334.1 |
| CNODPCNG_45 | 267779 | 268831 | clbC | ARO:3002816 | clbC | 100.00 | 100.00 | AP006627.1 |
| CNODPCNG_3 | 16706 | 17630 | BCL-1 | ARO:3004749 | BCL-1 | 100.00 | 98.05 | EF540343.1 |
| CNODPCNG_3 | 13541 | 14311 | ANT(4')-Ib | ARO:3003905 | ANT(4')-Ib | 100.00 | 100.00 | EF540343.1 |
| CNODPCNG_9 | 25 | 672 | Alkalihalobacillus clausii chloramphenicol acetyltransferase | ARO:3004452 | Acla_ACT_CHL | 88.68 | 94.30 | AY238971.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CNODPCNG_3 | 13541 | 14311 | ant(4')-Ib | Amikacin, Tobramycin, Isepamicin, Dibekacin | 100.00 | 100.00 | AJ506108 |
| CNODPCNG_9 | 1 | 670 | cat | Chloramphenicol | 97.49 | 97.38 | AY238971 |
| CNODPCNG_21 | 597831 | 598669 | erm(34) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 95.47 | 99.17 | AY234334 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CNODPCNG_3 | 13541 | 14308 | aadD2 | aminoglycoside O-nucleotidyltransferase ANT(4')-Ib | EXACTX | 100.00 | 100.00 | WP_035202393.1 |
| CNODPCNG_3 | 16724 | 17626 | blaBCL-1 | class A beta-lactamase BCL-1 | ALLELEX | 100.00 | 100.00 | WP_065825670.1 |
| CNODPCNG_9 | 28 | 672 | catA | type A-10 chloramphenicol O-acetyltransferase | EXACTX | 100.00 | 100.00 | WP_035203840.1 |
| CNODPCNG_45 | 267782 | 268831 | clbB | 23S rRNA (adenine(2503)-C(8))-methyltransferase ClbB | EXACTX | 100.00 | 100.00 | WP_011245929.1 |
| CNODPCNG_21 | 597830 | 598669 | erm(34) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(34) | BLASTX | 97.14 | 99.64 | WP_063844504.1 |
| CNODPCNG_21 | 700214 | 702805 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 80.14 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| CNODPCNG_11 | 531850 | 532500 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 99.69 | 100.00 | WP_011247375 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CNODPCNG_2 | 37207 | 36071 | tufA | 0.0 | elongation factor Tu | 87.33 | 95.69 | AHM69299 |
| CNODPCNG_1 | 42993 | 42751 | SpoVG | 2.58e-37 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| CNODPCNG_29 | 599949 | 600143 | CspA | 2.89e-29 | cold shock protein | 86.15 | 98.48 | CAA62903 |
| CNODPCNG_21 | 149302 | 149111 | msaB | 2.08e-25 | cold shock protein | 81.25 | 96.97 | ABD22065 |
| CNODPCNG_21 | 149299 | 149111 | CspB | 1.78e-24 | cold shock protein | 80.95 | 95.45 | CAD00094 |