Genome ID:GCA_018966905.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
0273342.64

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
CBEECMBO_102037720970STER_RS060300.0CapsuleImmune modulation100.00100.00WP_011226149
CBEECMBO_22154366155082STER_RS070850.0CapsuleImmune modulation100.00100.00WP_011681442
CBEECMBO_22155083156051STER_RS070900.0CapsuleImmune modulation100.00100.00WP_011681443
CBEECMBO_22145566147311STER_RS070450.0CapsuleImmune modulation99.94100.00WP_011681434
CBEECMBO_22147313149013STER_RS070500.0CapsuleImmune modulation99.94100.00WP_041827753
CBEECMBO_22157042158301STER_RS071000.0CapsuleImmune modulation99.92100.00WP_011681445
CBEECMBO_22151977153125STER_RS070700.0CapsuleImmune modulation99.91100.00WP_011681439
CBEECMBO_101950820377rfbA0.0CapsuleImmune modulation99.89100.00WP_011681286
CBEECMBO_22151039151980STER_RS070650.0CapsuleImmune modulation99.89100.00WP_011681438
CBEECMBO_22153244154020STER_RS070750.0CapsuleImmune modulation99.87100.00WP_011681440
CBEECMBO_22149031150233STER_RS070550.0CapsuleImmune modulation99.83100.00WP_011681436
CBEECMBO_102037720970STR_RS058800.0CapsuleImmune modulation99.83100.00WP_011226149
CBEECMBO_22147313149013STR_RS068900.0CapsuleImmune modulation99.77100.00WP_041827077
CBEECMBO_102037720970STU_RS152600.0CapsuleImmune modulation99.66100.00WP_011226149
CBEECMBO_22150233151039STER_RS070600.0CapsuleImmune modulation99.63100.00WP_011681437
CBEECMBO_22156069157045STER_RS070950.0CapsuleImmune modulation99.5999.90WP_011681444
CBEECMBO_549409395751fbp540.0FBPsAdherence99.58100.00WP_011227179
CBEECMBO_22149031150233STR_RS068950.0CapsuleImmune modulation99.58100.00WP_011227428
CBEECMBO_22151039151980STR_RS069050.0CapsuleImmune modulation99.36100.00WP_011227430
CBEECMBO_22151977153125STR_RS069100.0CapsuleImmune modulation99.30100.00WP_011227431
CBEECMBO_22150233151039STR_RS069000.0CapsuleImmune modulation99.13100.00WP_011227429
CBEECMBO_437869279660cbpD0.0AutolysinExoenzyme98.86100.00WP_082302295
CBEECMBO_756815268883STER_RS053150.0CapsuleImmune modulation98.63100.00WP_011681176
CBEECMBO_7513742167cshA0.0Cell surface hydrophobicity proteinsAdherence98.36100.25-
CBEECMBO_22145566147311STR_RS068850.0CapsuleImmune modulation98.28100.00WP_011227426
CBEECMBO_756815268883STR_RS052600.0CapsuleImmune modulation98.22100.00WP_011227248
CBEECMBO_756815268883STU_RS146450.0CapsuleImmune modulation98.09100.00WP_011226048
CBEECMBO_756959470334STER_RS053050.0CapsuleImmune modulation97.98100.00WP_011681174
CBEECMBO_756669168151STER_RS053200.0CapsuleImmune modulation97.95100.00WP_011681177
CBEECMBO_756959470334STU_RS146350.0CapsuleImmune modulation97.84100.00WP_011226046
CBEECMBO_71465215413srtA0.0Sortase AExoenzyme97.64100.00-
CBEECMBO_22158420159271rfbD0.0CapsuleImmune modulation97.42100.00WP_014621820
CBEECMBO_756959470329STR_RS052500.0CapsuleImmune modulation97.4298.13WP_011227246
CBEECMBO_756669168151STU_RS146500.0CapsuleImmune modulation96.92100.21WP_011226049
CBEECMBO_756889269584STR_RS052550.0CapsuleImmune modulation96.83100.00WP_011227247
CBEECMBO_756889269584STU_RS146400.0CapsuleImmune modulation96.83100.00WP_011226047
CBEECMBO_756669168151STR_RS052650.0CapsuleImmune modulation95.96100.21WP_041827043
CBEECMBO_757039171756STER_RS053000.0CapsuleImmune modulation94.6699.85WP_011681173
CBEECMBO_757039171758STU_RS146300.0CapsuleImmune modulation94.08100.00WP_011226045
CBEECMBO_756889269584STER_RS053100.0CapsuleImmune modulation91.78100.00WP_011681175
CBEECMBO_11120502121805eno0.0Streptococcal enolaseExoenzyme88.1099.46WP_000022832
CBEECMBO_131291139plr/gapA0.0Streptococcal plasmin receptor/GAPDHAdherence86.5499.41WP_002986042
CBEECMBO_22150233151039SGO_RS050200.0CapsuleImmune modulation83.27100.00WP_012000440
CBEECMBO_223393622tig/ropA0.0Trigger factorStress survival80.6599.77WP_000107753
CBEECMBO_102139922445rfbB0.0CapsuleImmune modulation80.61100.00WP_009659423
CBEECMBO_22149496150233SGO_RS050250.0CapsuleImmune modulation84.9660.29WP_012000441

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
CBEECMBO_71810019083ldh(Sp_1220)0.0L-lactate dehydrogenase94.82100.00AAK75326
CBEECMBO_111409313020MntE0.0manganese homeostasis94.4199.72ABF32167
CBEECMBO_331559813295pfl2(Sp_0459)0.0formate acetyltransferase92.9799.22AAK74619
CBEECMBO_11204050203082spr00840.0pathogenitcity related92.5798.48AAK98888
CBEECMBO_225072452205SPD_03100.0UPF0371 protein SPD_031092.11100.00ABJ54480
CBEECMBO_9113639117metE0.0methionine biosynthesis enzymes91.99100.00AAK74738
CBEECMBO_64047541473recA0.0DNA recombination and repair91.2985.82AAL00560
CBEECMBO_643625333prsA20.0ribose-phosphate pyrophosphokinase90.12100.00ABF36968
CBEECMBO_33129606130757potA0.0ABC transporter ATP-binding protein-spermidine/putrescine transport89.3299.74AAL00050
CBEECMBO_22172310170322uvrB0.0excinuclease ABC, B subunit88.84100.00AE014259_2
CBEECMBO_71901171ptsI0.0phosphoenolpyruvate-protein phosphotransferase88.04100.00AAK34199
CBEECMBO_742727328751IMPDH0.0inosine-5'-monophosphate dehydrogenase87.63100.00ADE32434
CBEECMBO_11121805120504Eno0.0enolase86.2199.77ABP90468
CBEECMBO_744245944351gidA0.0tRNA uridine 5-carboxymethylaminomethyl modification enzyme85.8998.90ABP91129
CBEECMBO_961937902PGM0.0phosphoglucomutase84.0699.65ACH87041
CBEECMBO_11886619876pdh0.0pyruvate dehydrogenase83.0999.70ABP91006
CBEECMBO_546873070091mnmE0.0central tRNA-modifying GTPase82.2499.56ABP90420
CBEECMBO_16919867306PepO0.0endopeptidase80.19100.00ABF32980
CBEECMBO_11136241135351bglB6.91e-180putative phospho--glucosidase88.8999.66AAK33487
CBEECMBO_31462613688SP_06767.46e-169transcription facot81.1597.20AAK74821
CBEECMBO_989258068metF1.50e-166methionine biosynthesis enzymes86.3699.31AAK74739
CBEECMBO_752985430558covR1.97e-132responder protein85.53100.00AAK71319
CBEECMBO_223175131080rr012.81e-126response regulator84.3899.56CAB54566
CBEECMBO_922381570CiaR1.52e-124two-component response regulator86.1099.55AAK74935
CBEECMBO_752985430558walR8.28e-123DNA-binding response regulator82.13100.00ANC99504
CBEECMBO_922381567ciaR2.06e-122two component system response regulator83.9399.12AIK75708
CBEECMBO_739182892514CovR3.45e-118serves to repress GAS virulence factor-encoding genes80.35100.00ACE75886
CBEECMBO_64174942123SpxA22.64e-71transcriptional regulator91.2094.70ERL21461
CBEECMBO_545736756966SpxA12.21e-67transcriptional regulator80.60100.00ERL19273
CBEECMBO_82559325306spr04793.02e-49essential gene86.4698.97AAK99283
CBEECMBO_43120538120792spr13272.09e-45essential gene95.29100.00AAL00131
CBEECMBO_747608675823spr01753.53e-42pathogenitcity related84.09100.00AAK98979
CBEECMBO_747525974993spr01777.73e-34essential gene84.2788.12AAK98981
CBEECMBO_237804280RopE (M5005_Spy_1611)1.67e-76probable DNA-directed RNA polymerase subunit delta81.4487.43AAK34603
CBEECMBO_331559813301PFL (B9H01_RS01125)0.0formate C-acetyltransferase82.9498.08MYN69560
CBEECMBO_15472953710ilvC (SPD_0406)0.0ketol-acid reductoisomerase (NADP(+))96.47100.00ABJ55451