Genome ID:GCA_019037525.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1210717.12

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PDEDJCAP_8675534676703bmrARO:3003007bmr99.49100.00M33768.1
PDEDJCAP_9596563596901ykkCARO:3003063ykkC97.32100.00AL009126.1
PDEDJCAP_9596246596563ykkDARO:3003064ykkD98.10100.00AL009126.1
PDEDJCAP_8481187482389bltARO:3003006blt99.00100.00L32599.1
PDEDJCAP_8454183455037aadKARO:3002627aadK98.94100.00AL009126.1
PDEDJCAP_10353957354877mphKARO:3004541mphK97.06100.00CP010314.1
PDEDJCAP_10340626342065lmrBARO:3002813lmrB99.79100.42JYFL01000006.1
PDEDJCAP_10290919291512tmrBARO:3003059tmrB97.97100.00AL009126.3
PDEDJCAP_11262028264598Bacillus subtilis mprFARO:3003324Bsub_mprF99.53100.00AL009126.3
PDEDJCAP_102878830434vmlRARO:3004476vmlR99.27100.18NC_000964.3

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PDEDJCAP_8454183455037aadKStreptomycin98.95100.00M26879
PDEDJCAP_76027261648tet(L)Doxycycline, Tetracycline, Minocycline, Tigecycline, Doxycycline, Tetracycline98.77100.00X08034
PDEDJCAP_10353957354877mph(K)Spiramycin, Telithromycin96.96100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PDEDJCAP_102878830431vmlRABC-F type ribosomal protection protein VmlRBLASTX99.27100.00WP_003234144.1
PDEDJCAP_8454183455034aadKaminoglycoside 6-adenylyltransferase AadKBLASTX98.94100.00WP_003229862.1
PDEDJCAP_76027261642tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.9199.78WP_003242953.1
PDEDJCAP_10353960354877mphKmacrolide 2'-phosphotransferase MphKBLASTX97.06100.00WP_003246254.1
PDEDJCAP_76367264190satAstreptothricin N-acetyltransferase SatABLASTX90.75100.00WP_003242546.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
PDEDJCAP_7557381558562capB0.0CapsuleImmune modulation99.75100.00NP_391471
PDEDJCAP_8875630876270hlyIII0.0Hemolysin IIIExotoxin99.5399.84NP_390062
PDEDJCAP_7966551967336dhbA0.0BacillibactinNutritional/Metabolic factor99.49100.00NP_391080
PDEDJCAP_7559045560187capA0.0CapsuleImmune modulation99.30100.00NP_391469
PDEDJCAP_7558577559026capC0.0CapsuleImmune modulation99.11100.00NP_391470
PDEDJCAP_7967362968558dhbC0.0BacillibactinNutritional/Metabolic factor99.08100.00NP_391079
PDEDJCAP_810132701015033dep/capD0.0CapsuleImmune modulation98.87100.00NP_389723
PDEDJCAP_7968587970206dhbE0.0BacillibactinNutritional/Metabolic factor98.64100.00NP_391078
PDEDJCAP_7971192978328dhbF0.0BacillibactinNutritional/Metabolic factor98.64100.00NP_391076
PDEDJCAP_7970234971172dhbB0.0BacillibactinNutritional/Metabolic factor98.19100.00NP_391077

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
PDEDJCAP_123174532881tufA0.0elongation factor Tu85.7595.69AHM69299
PDEDJCAP_141124710378pdxS1.11e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.7998.31ACE61268
PDEDJCAP_9284856284080CodY8.29e-125nutrient-responsive regulator81.08100.00ACJ80679
PDEDJCAP_7714795714226ClpP6.50e-99part of proteolytic complex81.0597.44BAB94595
PDEDJCAP_9747402747010spxA16.52e-70redox-responsive transcription factor83.97100.00AAF21893
PDEDJCAP_9747402747010spx3.89e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
PDEDJCAP_132055520797SpoVG7.50e-39RNA-binding protein81.4879.41AAT02994
PDEDJCAP_108428784090CspA1.93e-31cold shock protein90.91100.00CAA62903