Genome ID:GCA_019037645.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 13 | 10 | 7 | 17.83 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KEHGHMLM_3 | 1686911 | 1687249 | ykkC | ARO:3003063 | ykkC | 100.00 | 100.00 | AL009126.1 |
| KEHGHMLM_3 | 1686594 | 1686911 | ykkD | ARO:3003064 | ykkD | 99.05 | 100.00 | AL009126.1 |
| KEHGHMLM_3 | 699698 | 700867 | bmr | ARO:3003007 | bmr | 99.74 | 100.00 | M33768.1 |
| KEHGHMLM_3 | 478270 | 479472 | blt | ARO:3003006 | blt | 99.75 | 100.00 | L32599.1 |
| KEHGHMLM_3 | 459929 | 460783 | aadK | ARO:3002627 | aadK | 98.59 | 100.00 | AL009126.1 |
| KEHGHMLM_5 | 347608 | 348528 | mphK | ARO:3004541 | mphK | 98.69 | 100.00 | CP010314.1 |
| KEHGHMLM_5 | 334287 | 335726 | lmrB | ARO:3002813 | lmrB | 99.16 | 100.42 | JYFL01000006.1 |
| KEHGHMLM_6 | 301727 | 304297 | Bacillus subtilis mprF | ARO:3003324 | Bsub_mprF | 99.88 | 100.00 | AL009126.3 |
| KEHGHMLM_5 | 284604 | 285197 | tmrB | ARO:3003059 | tmrB | 98.48 | 100.00 | AL009126.3 |
| KEHGHMLM_5 | 29161 | 30807 | vmlR | ARO:3004476 | vmlR | 98.72 | 100.18 | NC_000964.3 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KEHGHMLM_4 | 1027937 | 1029313 | tet(L) | Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline | 100.00 | 100.00 | X08034 |
| KEHGHMLM_3 | 459929 | 460781 | aadK | Streptomycin | 99.30 | 99.77 | M26879 |
| KEHGHMLM_5 | 347608 | 348528 | mph(K) | Spiramycin, Telithromycin | 99.24 | 100.00 | NC_000964 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KEHGHMLM_4 | 1027940 | 1029313 | tet(L) | tetracycline efflux MFS transporter Tet(L) | EXACTX | 100.00 | 100.00 | WP_003242953.1 |
| KEHGHMLM_5 | 29161 | 30804 | vmlR | ABC-F type ribosomal protection protein VmlR | BLASTX | 98.72 | 100.00 | WP_003234144.1 |
| KEHGHMLM_5 | 347611 | 348528 | mphK | macrolide 2'-phosphotransferase MphK | BLASTX | 98.69 | 100.00 | WP_003246254.1 |
| KEHGHMLM_3 | 459929 | 460780 | aadK | aminoglycoside 6-adenylyltransferase AadK | BLASTX | 98.59 | 100.00 | WP_003229862.1 |
| KEHGHMLM_4 | 1025420 | 1025938 | satA | streptothricin N-acetyltransferase SatA | BLASTX | 89.60 | 100.00 | WP_003242546.1 |
| KEHGHMLM_3 | 1005657 | 1008254 | rphC | rifamycin-inactivating phosphotransferase RphC | BLASTX | 81.17 | 100.00 | WP_087347987.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KEHGHMLM_4 | 526584 | 527033 | capC | 0.0 | Capsule | Immune modulation | 100.00 | 100.00 | NP_391470 |
| KEHGHMLM_3 | 899618 | 900259 | hlyIII | 0.0 | Hemolysin III | Exotoxin | 100.00 | 100.00 | NP_390062 |
| KEHGHMLM_4 | 527048 | 528229 | capB | 0.0 | Capsule | Immune modulation | 99.75 | 100.00 | NP_391471 |
| KEHGHMLM_4 | 112795 | 113580 | dhbA | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.75 | 100.00 | NP_391080 |
| KEHGHMLM_4 | 108959 | 109897 | dhbB | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.68 | 100.00 | NP_391077 |
| KEHGHMLM_4 | 111573 | 112769 | dhbC | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.25 | 100.00 | NP_391079 |
| KEHGHMLM_4 | 101803 | 108939 | dhbF | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 99.12 | 100.00 | NP_391076 |
| KEHGHMLM_4 | 525423 | 526565 | capA | 0.0 | Capsule | Immune modulation | 99.04 | 100.00 | NP_391469 |
| KEHGHMLM_3 | 1056483 | 1058246 | dep/capD | 0.0 | Capsule | Immune modulation | 98.87 | 100.00 | NP_389723 |
| KEHGHMLM_4 | 109925 | 111544 | dhbE | 0.0 | Bacillibactin | Nutritional/Metabolic factor | 98.27 | 100.00 | NP_391078 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KEHGHMLM_7 | 31713 | 32849 | tufA | 0.0 | elongation factor Tu | 84.96 | 95.69 | AHM69299 |
| KEHGHMLM_9 | 4306 | 5175 | pdxS | 1.11e-151 | encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS | 83.79 | 98.31 | ACE61268 |
| KEHGHMLM_3 | 1376982 | 1376206 | CodY | 1.71e-124 | nutrient-responsive regulator | 81.08 | 100.00 | ACJ80679 |
| KEHGHMLM_4 | 364861 | 365430 | ClpP | 6.40e-99 | part of proteolytic complex | 81.05 | 97.44 | BAB94595 |
| KEHGHMLM_3 | 1836923 | 1836531 | spxA1 | 1.35e-69 | redox-responsive transcription factor | 83.97 | 100.00 | AAF21893 |
| KEHGHMLM_3 | 1836923 | 1836531 | spx | 8.03e-68 | essential gene which is a thiol/oxidative stress sensor | 80.15 | 100.00 | BAB57159 |
| KEHGHMLM_8 | 34708 | 34466 | SpoVG | 7.50e-39 | RNA-binding protein | 81.48 | 79.41 | AAT02994 |
| KEHGHMLM_5 | 81991 | 81794 | CspA | 1.90e-31 | cold shock protein | 90.91 | 100.00 | CAA62903 |