Genome ID:GCA_019038065.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
1310818.25

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GFOAJMHB_5504830505168ykkCARO:3003063ykkC99.11100.00AL009126.1
GFOAJMHB_5504513504830ykkDARO:3003064ykkD99.05100.00AL009126.1
GFOAJMHB_8345826346746mphKARO:3004541mphK97.71100.00CP010314.1
GFOAJMHB_8332491333930lmrBARO:3002813lmrB99.16100.42JYFL01000006.1
GFOAJMHB_9283147285717Bacillus subtilis mprFARO:3003324Bsub_mprF99.65100.00AL009126.3
GFOAJMHB_8282779283372tmrBARO:3003059tmrB98.98100.00AL009126.3
GFOAJMHB_6267350268204aadKARO:3002627aadK97.54100.00AL009126.1
GFOAJMHB_6250553251755bltARO:3003006blt99.75100.00L32599.1
GFOAJMHB_82895730600vmlRARO:3004476vmlR98.72100.00NC_000964.3
GFOAJMHB_62044021609bmrARO:3003007bmr99.23100.00M33768.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GFOAJMHB_43637537751tet(L)Doxycycline, Tetracycline, Doxycycline, Tetracycline, Minocycline, Tigecycline98.69100.00X08034
GFOAJMHB_6267352268204aadKStreptomycin98.4899.77M26879
GFOAJMHB_8345826346746mph(K)Spiramycin, Telithromycin97.61100.00NC_000964

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GFOAJMHB_82895730597vmlRABC-F type ribosomal protection protein VmlRBLASTX98.72100.00WP_003234144.1
GFOAJMHB_43637537748tet(L)tetracycline efflux MFS transporter Tet(L)BLASTX98.69100.00WP_003242953.1
GFOAJMHB_8345829346746mphKmacrolide 2'-phosphotransferase MphKBLASTX97.71100.00WP_003246254.1
GFOAJMHB_6267353268204aadKaminoglycoside 6-adenylyltransferase AadKBLASTX97.54100.00WP_003229862.1
GFOAJMHB_43970440222satAstreptothricin N-acetyltransferase SatABLASTX90.17100.00WP_003242546.1
GFOAJMHB_7288914291511rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.48100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GFOAJMHB_7192292192933hlyIII0.0Hemolysin IIIExotoxin100.00100.00NP_390062
GFOAJMHB_4513929515110capB0.0CapsuleImmune modulation99.75100.00NP_391471
GFOAJMHB_4515593516735capA0.0CapsuleImmune modulation99.39100.00NP_391469
GFOAJMHB_4932635933420dhbA0.0BacillibactinNutritional/Metabolic factor99.36100.00NP_391080
GFOAJMHB_4515125515574capC0.0CapsuleImmune modulation99.33100.00NP_391470
GFOAJMHB_4936318937256dhbB0.0BacillibactinNutritional/Metabolic factor99.25100.00NP_391077
GFOAJMHB_4933446934642dhbC0.0BacillibactinNutritional/Metabolic factor99.17100.00NP_391079
GFOAJMHB_4937276944412dhbF0.0BacillibactinNutritional/Metabolic factor99.09100.00NP_391076
GFOAJMHB_4934671936290dhbE0.0BacillibactinNutritional/Metabolic factor99.07100.00NP_391078
GFOAJMHB_7336608338371dep/capD0.0CapsuleImmune modulation98.70100.00NP_389723

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GFOAJMHB_102799826862tufA0.0elongation factor Tu84.9695.69AHM69299
GFOAJMHB_1243085177pdxS2.57e-151encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS83.4598.31ACE61268
GFOAJMHB_5194235193459CodY7.55e-125nutrient-responsive regulator81.08100.00ACJ80679
GFOAJMHB_4677550676981ClpP2.13e-98part of proteolytic complex80.5397.44BAB94595
GFOAJMHB_5655299654907spxA15.94e-70redox-responsive transcription factor83.97100.00AAF21893
GFOAJMHB_5655299654907spx3.54e-68essential gene which is a thiol/oxidative stress sensor80.15100.00BAB57159
GFOAJMHB_112057720819SpoVG7.51e-39RNA-binding protein81.4879.41AAT02994
GFOAJMHB_88181781620CspA1.89e-31cold shock protein90.91100.00CAA62903
GFOAJMHB_7180329180135CspD2.89e-28cold shock protein81.5498.48CAC99957