Genome ID:GCA_019041775.1
Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 1 | 0 | 5.10 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KDKGEJEE_80 | 114975 | 116900 | tet(Q) | ARO:3000191 | tet(Q) | 98.75 | 97.56 | Z21523.1 |
| KDKGEJEE_99 | 34099 | 35001 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KDKGEJEE_99 | 34099 | 35001 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | L13472 |
| KDKGEJEE_93 | 2456 | 3258 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.63 | 100.00 | M17808 |
| KDKGEJEE_80 | 114975 | 116900 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | Z21523 |
| KDKGEJEE_150 | 62496 | 63446 | cfxA4 | Unknown Beta-lactam | 86.12 | 98.34 | AY769933 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KDKGEJEE_99 | 34102 | 35001 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| KDKGEJEE_93 | 2692 | 3258 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 99.47 | 71.05 | WP_002682030.1 |
| KDKGEJEE_80 | 114978 | 116900 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_002560998.1 |
| KDKGEJEE_150 | 62494 | 63447 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | BLASTX | 83.65 | 99.07 | WP_057280848.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KDKGEJEE_127 | 4488 | 5681 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 100.00 | 100.00 | BAA77275 |
| KDKGEJEE_127 | 4488 | 5681 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 96.90 | 100.00 | BAA77277 |
| KDKGEJEE_127 | 4488 | 5681 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 94.47 | 100.00 | BAA77276 |
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||