Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GGEOPHOE_5 | 171262 | 172398 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| GGEOPHOE_5 | 170249 | 171049 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| GGEOPHOE_4 | 168499 | 169389 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
| GGEOPHOE_21 | 34386 | 36359 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GGEOPHOE_5 | 170249 | 171049 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| GGEOPHOE_21 | 34386 | 36311 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| GGEOPHOE_5 | 171262 | 172428 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| GGEOPHOE_11 | 67797 | 68747 | cfxA3 | Ampicillin | 85.91 | 98.34 | AF472622 |
| GGEOPHOE_11 | 67797 | 68747 | cfxA4 | Unknown Beta-lactam | 85.91 | 98.34 | AY769933 |
| GGEOPHOE_11 | 67797 | 68747 | cfxA5 | Unknown Beta-lactam | 85.91 | 98.34 | AY769934 |
| GGEOPHOE_11 | 67797 | 68747 | cfxA | Cefoxitin, Ampicillin | 85.91 | 98.34 | U38243 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GGEOPHOE_5 | 170249 | 171046 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| GGEOPHOE_21 | 34389 | 36311 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| GGEOPHOE_5 | 171265 | 172428 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.48 | 100.00 | WP_008651082.1 |
| GGEOPHOE_4 | 168499 | 169386 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
| GGEOPHOE_11 | 67796 | 68749 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.33 | 99.07 | WP_004339683.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||