Potential risk score of uploaded strain
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 1 | 7.07 |
CARD
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CCAIKFNJ_120 | 137454 | 137942 | nimE | ARO:3007107 | nimE | 80.86 | 95.29 | CP036548.1 |
| CCAIKFNJ_37 | 93661 | 95586 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| CCAIKFNJ_83 | 26116 | 27321 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| CCAIKFNJ_107 | 9161 | 10126 | CfxA2 | ARO:3003002 | CfxA2 | 99.69 | 100.00 | AF118110.1 |
| CCAIKFNJ_122 | 122 | 856 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
Resfinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CCAIKFNJ_122 | 122 | 856 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | M15332 |
| CCAIKFNJ_37 | 93661 | 95586 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| CCAIKFNJ_107 | 9161 | 10126 | cfxA3 | Ampicillin | 99.79 | 100.00 | AF472622 |
| CCAIKFNJ_107 | 9161 | 10126 | cfxA4 | Unknown Beta-lactam | 99.79 | 100.00 | AY769933 |
| CCAIKFNJ_107 | 9161 | 10126 | cfxA5 | Unknown Beta-lactam | 99.79 | 100.00 | AY769934 |
| CCAIKFNJ_107 | 9161 | 10126 | cfxA | Cefoxitin, Ampicillin | 99.79 | 100.00 | U38243 |
| CCAIKFNJ_66 | 42638 | 43855 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
| CCAIKFNJ_120 | 137454 | 137933 | nimE | Metronidazole | 81.25 | 93.57 | AM042593 |
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CCAIKFNJ_83 | 27346 | 27855 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| CCAIKFNJ_107 | 9164 | 10126 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 99.69 | 100.00 | WP_004339683.1 |
| CCAIKFNJ_122 | 122 | 853 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_014387027.1 |
| CCAIKFNJ_37 | 93664 | 95586 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| CCAIKFNJ_83 | 26116 | 27318 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| CCAIKFNJ_66 | 42638 | 43858 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
| CCAIKFNJ_120 | 137454 | 137939 | nimE | 5-nitroimidazole reductase NimE | BLASTX | 80.86 | 95.29 | WP_005812773.1 |
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CCAIKFNJ_48 | 51228 | 52808 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |