Genome ID:GCA_019396925.1 PPRS_table
 

Potential risk score of uploaded strain

ARGs VFs PGs PPRS
2244.90

CARD

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
GAJDFOMF_123543522355401clbAARO:3002814clbA99.71100.00CP006845.1

Resfinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
GAJDFOMF_123543522355387cfr(B)Chloramphenicol, Florfenicol, Clindamycin, Lincomycin, Linezolid, Dalfopristin, Pristinamycin IIA, Virginiamycin M, Tiamulin88.9098.67KR610408

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
GAJDFOMF_123543522355398clbA23S rRNA (adenine(2503)-C(8))-methyltransferase ClbABLASTX99.71100.00WP_012116915.1
GAJDFOMF_136372303639824rphCrifamycin-inactivating phosphotransferase RphCBLASTX80.00100.00WP_087347987.1

Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
GAJDFOMF_113261351327316capB0.0CapsuleImmune modulation81.9699.66NP_391471
GAJDFOMF_113256711326120capC6.94e-117CapsuleImmune modulation84.0399.78NP_391470

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
GAJDFOMF_119463451947481tufA0.0elongation factor Tu86.8195.69AHM69299
GAJDFOMF_118314421832311pdxS1.01e-149encodes the putative pyridoxal 5'-phosphate synthase subunit PdxS84.8398.31ACE61268
GAJDFOMF_134350413435817CodY4.80e-124nutrient-responsive regulator81.08100.00ACJ80679
GAJDFOMF_1961293960421lipA (SAUSA300_0829)8.86e-162lipoic acid synthetase80.8295.41ABD22039